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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23442c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_negative_elongation_factor_D_[Amyelois_transitella]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007070 P obsolete negative regulation of transcription from RNA polymerase II promoter during mitotic cell cycle
GO:0008023 C transcription elongation factor complex
GO:0017053 C transcription repressor complex
GO:0022008 P neurogenesis
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:11.79 TPM:11.55
ORF EntryO_TrvaFAMAMG27530_complete:A_TrvaFAMAMG_TR23442c0_g1_i1
Sequence
(Nucleotide)
CCTAAAGTGTAAACAATTTACTTATTTTCTCTAAATTGTTCTAAATAAATAAAATTGAAT
GAATTATTTTTCGTAGACATCAAAAACGATTCATAATATTGTATATTAAGGATAGTAATA
TCAAATTAGTATAAGCTATAGATTTTACTTGAGTTACGTGTACTCCTGTGTACTCATTAA
AAGTTATACATTGTTATTTATTTTTACTTTAATATTTTACATGTTCCGTTCATTTAACTA
TTAATAATTAAAACTTATGTATTACAAATTTAAAAATAATACGTAAAATTATAGACAAGA
CCATGCCTAGTCAATACGAAGACGAACGCGTTTGGGAAGGGACGAACCACAATAATCAAT
ATGAAGATGATGGAAATGAAGATGTCATTGAAAATCCTGAAGAAGTATTAAATGAATGTC
TGGAGAAATTTAAAACTCCCGACTATATTATGGAGCCTGGAATATTTGGTCAACTGAAAA
GGTACTTCCAAGCTGGAGGAAATCCTGAACAAGTAATTGAGCAATTGTCCATGAACTACA
ATGCTGTAGCACAAATGGCCAACCTTTTAGCAGAATGGCTAATACTTGGAGGAGTTAAAG
TTAGTGAAGTTCAAGCAATGGTCGAAAATCATTTAAAAGATATGATACTCAAAACATTTG
ATCCTAAAAAAGCTGATACAATATTCACAGAAGAGGGAGAGACACCTGCTTGGCTGACAG
AAATGATTGAACATCCCACTTGGAGATCTTTAATTTATAGACTGGCTGAAGAATATCCTG
ATTGTTTGATGTTAAACTTTACCATAAAGCTTATATCTGATGCTGGTTTTCAAGGAGAAA
TTACTAGCATATCAACAGCTGCACAACAAATAGAGGTATTTTCCAGAGTTCTGAAATCAG
CCATAGTTGGATTTCTTCAAAGTTCAGACGACTGGCAAAATAGTGTCAATGAATGTGCAA
AAATGGTGTGCCATGGTGCTCACACTTATGTATATAGCCAAGTAATTGTTCACATTTTGT
CACAAGAACCAAGAGGTGGTGCTATTATGAAGAGGTTGAGTCAGGAAATAACACGTTGTG
CTCAACAAGGTGGTCATGATGTCACTCCGATAACACTAGCTCTAACAGCGGGGGAAAGTT
GGCGCAATGCTCGAACTGCCCTGGCCGCCATGTTGTCCCGAGGCGCTCTCAACCCGGCCG
ACATATCAGTATTGTTCCGAGCTTACACTCAGACAGATCCTCCACCAGTTCATTTGCTTA
GAATACCACAGTTTTTAGAATTACTTGTTGATTCACTTTTCAAATCTGGCAGCAAATTAA
ATCCAGAACACAAGTCCAAATATATGTATCTTCTGGCATATTCTGCCAGTGTTTGTGAGA
GTCCCAGTCCGGGCAAGCCGGTCAAAGACGAACTAAAGGCGACAGTGCAAGCTATTGAAA
AAGTACACGCTGTATGCAGCAGCTCTGCAAGCTCTAGCGAACTAATAGCTGAACTTCCAA
CTCTATACCATTGCATAAGATTTCCCGTTGTCGGTATGGGAGTTTTAGTTTGGGTTGAAT
GTGTTGTGACTGAACCTTCGTACTTCAAACTCTGCACTGAACATTGTCCTCTGCATCTTG
CATTGTTAGATGAAGTAGCATCTTGTCATCCTTTGCTACATCACAGACTTCTGAGATTAT
TGGTAAAACTCTTTGAATCTCCGCAAGACGAATTGGAAATATTAGTTCAGCTGGAATTGA
AAAAAATGTTATTAGATAGAATGGTAAATCTATTAAGTCGCGGTTGTGTTGTTCCTGTTC
TCCGATATATTAAACAATGTTGGCAACGTGGTGATACAGATATATCACTAATAAGATATT
TTATAACTGAGGTTTTGGATGCAATAGCACCCCCTTATACACCAGAGTTTGTGCAATTAG
TGCTACCTATGGTAGAAAATGAAGAAATAACTGGAACAATGAGAGCAGAAGGGGAAAACG
ATCCTGTATCTGAATTTATTGTTCACTGCAAAGCACATTTCGTCGTTGTTTGAAGATTAC
ATACATTTAATTAATTACATTATTATAATTAACAATTAAAATCTTATTATTCCTGTTTTA
TTGTAAATACTCTTAGTTCATCGTTACAGTATCTAACATCCTCTTGCAGCTTTTCTTTCA
TAATATCGTCTAAGTGCTTCTTCAAACACAACCCCAACAGTTCGCTTTTTCCAAATGTCA
ATTTTTTCTTTTATCTCAACCTCACTATTCTCAATAGTCAGAGTTGTATTTTGTGATTCT
GATTTTATTACATTCATCTTATTCTGTTCATTTTCATCACTCTTTGGAGGATCTCCCTTT
GTTGTTTTTAAATTTGGTTGTTTATCTTCTCCATCACTAGAATCATCAATTGAAAAATCA
GAATCAGCATCTATATTCTCATTATCTTTTTTCAATCTTTTTATTTTTCTTATATGTTCA
AGATTCAGACGATTCACTTCTTCATCAGAATCCTCAATTTCACCATCAGACAACAAGTCA
TTATTGTCCGTAAGTTCCCTTTTACGATAATTTCTTTTCTTTACAGTTTCCACAGGATCC
TTATTTTTATGACAATGGTTTTTCTCATTTTTTTCACTCCCTCTGTTATCACCTTTTCCT
AATTTTTGCTCATACAAATGACGATAAAACCCACCTAAGTCATGTTGCTTAGTTACATCT
CCTATGCTTTCAAGATAATCTTCTCGTTTTTCTTTTTCTTCTTCTTCCTTCAATTCTTCT
AATTTCTTTTTATAAGCAGATGTTACAAATACTTCTTTATCTTTAAATTCATCCCCTTCC
TTTTCCCTTTCCTTTTGAATCTGTCTTTCAATTCGGCGCTCATTTTCTAATTTTCTTTTA
TTAGCTGTCTTTATTAAGTTTTCAATATATTTAGGCTTTTTATCAGCAGATTTCTTTTCC
TTTTCTTTCTCCTTCTTATTCTTAACGTCTTCATATATTTCATCATATTGATAAACAGTA
GGATCTTCCAATAATGCTTTTTCTTGAGATATTTTTGCCTGCCTGTTAACGTTCTCACTT
GGACGTAACAATTGTTTTTTCTTTGGATCATCATCAGAATCCGACTCGTCTCCAAAAACG
TTACGAGATGCTTGAAATGTAAGTGAATTCGATCGTTGACTATTCTTCTCTGATAGATTC
AAACCATATTTTTTCGTTGCCATCTCTGCGAAAAACTCATGAAAACATCAATAACAGAAA
AAATCGAAGAAAACCCGCAAAATTCTTGAAATCAATGTCCTACGTAACCCCAATTTTTTT
AATTTATT
(3308 bp)

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