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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2334c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Hermansky-Pudlak_syndrome_5_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0006622 P protein targeting to lysosome
GO:0006726 P eye pigment biosynthetic process
GO:0006727 P ommochrome biosynthetic process
GO:0007601 P visual perception
GO:0031084 C BLOC-2 complex
GO:0031409 F pigment binding
GO:0048072 P compound eye pigmentation
GO:0050896 P response to stimulus
GO:0060967 P negative regulation of gene silencing by RNA
Transcript
Level		FPKM:1.60 TPM:1.57
ORF EntryO_TrvaFAMAMG1569_3prime_partial:A_TrvaFAMAMG_TR2334c1_g1_i1
Sequence
(Nucleotide)
CTTTAACAACAAATTCCACCAATTGTTTTTTCTGAGTGATTCGCGAGGAACTGCATGAAA
TTATTTGTAAATAAGAAAAATGGTGTTTTAACATGTCTTGTAATATGTATCCTCCTTATA
TATTGGTGGAGCTCCCGAACGTGACTGACTGTATTCATTATCCAGTGAAAAATGTACAAC
GTATCAAATACACATGTTTTGATGTTTCAAAGTCTTTACTGGCATTCGGAGCAACTAGCG
GAGGGATATACATATTCAACAAGAATCCATGTGAATTTGTCCAACTTATTCCTAACAAGG
ACGGCGCCATTACTCGCGTCTCGATCTCCTCTGACGAGAAGCACGTTGGTTTCGCGAACG
GTCGCGGCGTGATCACCGCCACAGGTTGCGAACAAGGTCCCAATGCCCTTCGATCCACCG
TCACCTCTAAAGAGCACCAGGGCAACGAGGTCACGGCCCTGGTGTGGCGTAACAATATGC
TTTTCAGCGGCGATGATGTCGGAAAGATTGCTGTGTTGCAGCTGCAGAGTTTTATCGCAA
AAACAATGTTCCAGAGTTCATCACAAACCATAATGTGTTTAGATTCTCGTATCTGTCAAA
TTGACGTTAAATCCTACATGTTGTTAGTTTCCACTTTAACCAGGTGTTACCTTTGTGATA
CCACCGAAGAACAATACAGACAGATAGGCCAGAAACTGAGAGACGGTGAATTTGGTGCTT
GTTTTTTCACAAAAGAGCATGTTGTCGAAGTGAATACGAATAACATCAAAGATTATTCCG
AGGTTAGGAAGTATAATGCGGTCGATGAGGGTGCTAGATTTGCTGTCGGAAAAGAATTAG
ATAATACGTTGGTTTTTTGCGCGAGACCTTCCTCTAGATTGTGGGAAGCGACTGTAGATG
GAACGGTCAAAAGAACACATCAGTTTAAGCAGATTTTGGGCCAAAATTCCATGAATATTC
TCACTGAAGACTCTTATAATAGAGAAGAGTTTGATTTCGAAGTCTCTTCAGTAAACAAAG
ACGGTGTTTCTGTTAATTTTACAAAGATTTACAATTTGAATGGTGTGATATTTTCGTATA
AAAAAGACGCCCTATTTTTCCTCAATCTAGACAACGTTGACCACACAGTTTGGTACAATC
AATACAAAAATATAACTGATTGTAAAGTGTACAAAGATACAATATATATCTGGTTGAGTA
ATGGTTCCTTAATTAATTTAAAATTCATGAAAATCGACAAGTTTTTGATTAAAAGCTATG
TCGAAGGTAAATTGACGTTATGTGCCAATACGTGCGCTTTCTTCAAAGATTATCTAATAA
CAGATGATGTATCTTCAAGATTACATATACTATCTAGTCTAAGAGACAAGCTTGAAAACA
AAGAACTAGTCGAAACAATTGAAAGCGTTTTAGAAAAGTTTGAAAAATTAAGAGAAAACG
AAGCTAAACAAGTCAAATCTGGAATATACGTAGTCGATAATACGTACAATGCTCAATCTT
CACTCAATGATGCCACCGAAAATTCTAATAACAATGAGGAATACAGTTTTGGCAATATAC
CTCCAGAAGCGATGCAAACGCTTAAAGATTTCAGCGTATCCGTTACAGACAAATTAAATA
CCAGCAAAAAGATATTAAAAGAAAAATGGGACGATTTCGAAGGGAAAATGAAACATCTCA
ACGTTGAAAAATCACAAGAAAAACCTACAACTATATTACCAAGTTTACCCCCAAAAAAAA
TATCAAGAGAGGAATC
(1756 bp)

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