SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23347c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_WW_domain-binding_protein_11_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0008599 F protein phosphatase regulator activity
GO:0016607 C nuclear speck
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0050699 F WW domain binding
GO:0050790 P regulation of catalytic activity
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:6.70 TPM:6.57
ORF EntryO_TrvaFAMAMG27513_complete:A_TrvaFAMAMG_TR23347c0_g2_i2
Sequence
(Nucleotide)
TCAAAATCAACAAAACTCATCTTTGCTGAAAAGTATTGTTTGTAAAAGTAGAAATTAAAA
GAAAAGTTACATCGTAGATTAGAAATAAAAAAATAAATATTCGCTTAGAGTCTTGTGCTA
CACATAGTATATCACTTTTTTCTATTTAGCTCGTACAAGGAATCTAACAAAATGGGGCGC
CGATCTATAAACACCACAAAAAGTGGTAAATACATGAACCCAACCGACCAAGCAAGAAAA
GAAGCAAGGAAGAAAGAGCTAAAGAAGAACAAAAGACAGCGACAAATGGTCAGAGCTGCT
GTGCTCAAAATGAAAGATCCAGTTCAAATATTAGAAGAATTGCAAAAGATTGATGAAATG
GAATTTAATGTACTGCAGCCATCTCCTTTAAATGAAAAAGTATTAAAAGAGAAAAGAAAG
AAACTTAAGGAAACATTTGACAGAGTACTCAAGATGTATGATAAAGATGAACCAGAAAAA
TGGGTCGATCTGAAGCGTCAAGAGATGGAGTATGAAAAGAGAAGAGCCCATCTAATTTCA
TACTATGAATCAGTGAAACATGCACAATCAGTGCAACTAGATGATATTCCATTACCAGCT
ATACAAGTCCCAGAGAATATACTTTTCAACACAGCTCCTTCACAAATTCCACTACCGTCT
GATGTACCTGTACCACCTACTCAAGTTAAATCTATACTCAAAAAGGATACAGCATACAAA
GAAAAACCAGCAGGCGTAGAACCACCAGGGGTGCCTCCTGGTCCACCAGTGGACTTCCAT
GCTCTGCTAGTAGAAGCTAAACATGATAAGAAAAAAAGTCTTAGATTTGCTGAAATTATT
GATGAAGGTCCACCTGGAGAGACTGTGCTACCACCAAAACCGCCACAACTTCCGCCACCC
ATAGAGAACTTGGACGGCGAAGCGATAGATGAACCAGAGACTCCGGCCGGCGCCACGCCT
GCTCCCAAACCCACCTCGCTGCAGCAGAGGATGCTGGCCTTGTCCGGACAAAACATAGAC
GACTTCATGAAAGAGATGGAAGAAGTACACAGGAAGAGAGAACGAGATAGAGCTGCTGAT
TTGAATGCTAGGTTGAGTGCACTGAAACGCGTCGAGGGACGTGACAGCGACTCGGACAGC
GACGTGGAGGTGATCCCGCCGCCGCCGCCGCCGCTCCTCCCGCACGACTACCCGCTGGAG
CCGCCCGGACTCGAGCTCAGGAACGTGCCGCCGCCGCCGCTACTGCCGCCTGGTATCCGG
CCAGTACTGCGCCTCGGTCCCCGGGGCCCACCGCCGGGCGCCCCGCCGCGCCTGCACCGG
CCCGCGCCGCCCAAGCCCGCGCCGCACGTGTCCGTGCTGTCCGCCGCGCCGCAACTCATC
ACCAAGAAGGACGCACAAGGTGCAACTATAAGTGCGAAACCACAAATCAGAAATCTTTCA
GCGGACGTCACAAGATTCGTTCCTTCAGCTTTGAGAGTCAAACGAGAAGACAAGAAGTCG
AAACCAATCAAATCAAACTTACACAAACCGACAGACATACCAAAACAAGCGCCAAGCAAG
GACGATGCCTATTCGCAGTTTATGAGAGAAATGGAGGGATTATTATAAAGAATGACTTAT
TTACAAATTCGTTACACAGTAGCTGAAATAAACTTATTTGATGGAAATATTAAATGTACA
CAAATTGACCAGGAAACGAATACAGAATACTTGTAAATATCATCAACATTGACTTCAGAG
TTGTGATGAAATATTTGATAAGTGAATTTTAGTCAGTCTTAATCAAACTCTACTATAGAT
TTCTTCATTCGTCAAATGCAAGATATAAGACATAATTTGTACTACTTGAAAAATTTGATA
AACTAACTATATTATACAGGGTGTAAAACAATCACTCCTGAAAACGAAAACTGGTGGTAG
TACTAGTGATATCCGTTATAATAAAAATGGAAACCAGTATATGTACCGGTTTACCGGTAT
GGACGATTTTTTTTTACCCATTTTTACGCTCATTCACATAAAATT
(2025 bp)

- SilkBase 1999-2023 -