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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23332c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		Band_4.1-like_protein_5_[Operophtera_brumata]
Ontology
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001837 P epithelial to mesenchymal transition
GO:0001839 P neural plate morphogenesis
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0003382 P epithelial cell morphogenesis
GO:0003383 P apical constriction
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005925 C focal adhesion
GO:0006931 P substrate-dependent cell migration, cell attachment to substrate
GO:0007398 P ectoderm development
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0007509 P mesoderm migration involved in gastrulation
GO:0008092 F cytoskeletal protein binding
GO:0009826 P unidimensional cell growth
GO:0010608 P posttranscriptional regulation of gene expression
GO:0010634 P positive regulation of epithelial cell migration
GO:0010718 P positive regulation of epithelial to mesenchymal transition
GO:0019898 C extrinsic component of membrane
GO:0019904 F protein domain specific binding
GO:0022408 P negative regulation of cell-cell adhesion
GO:0030036 P actin cytoskeleton organization
GO:0030054 C cell junction
GO:0031032 P actomyosin structure organization
GO:0031252 C cell leading edge
GO:0032091 P negative regulation of protein binding
GO:0032092 P positive regulation of protein binding
GO:0032525 P somite rostral/caudal axis specification
GO:0032587 C ruffle membrane
GO:0048318 P axial mesoderm development
GO:0048319 P axial mesoderm morphogenesis
GO:0048339 P paraxial mesoderm development
GO:0048617 P embryonic foregut morphogenesis
GO:0051894 P positive regulation of focal adhesion assembly
GO:0070201 P regulation of establishment of protein localization
GO:0070986 P left/right axis specification
GO:0071560 P cellular response to transforming growth factor beta stimulus
Transcript
Level		FPKM:4.06 TPM:3.98
ORF EntryO_TrvaFAMAMG27430_complete:A_TrvaFAMAMG_TR23332c1_g1_i1
Sequence
(Nucleotide)
ATATAAGGTTTAATTATGATAAATTATATTGTAAATTAAGTACATTTAAATAATTACCAT
TGTTGGACGAATTTTTTAAATTGACAATAATTGCGAGCACCTTAACACTTAAAATTATAA
AGGCAATGGACCTAAGGCACTAAAGCTTATATTTCGATTAAAATCACATAAAATAAGAAA
TAAATAACGTTTATATTGTCATTTTATAAAATGGAATAACATATTCCAATACCAAAAACA
AATAAATCTCTTTCAAAAACAAAATAAATTTTCCAGTAACTTGTTTATAAACCACCAGTT
TCTTTTTGTGATGGATTAAAGCTGTGTCGTTATGACTGACTTACGATGTATGATAGTGAT
CTCTTTTTCACCTATACCTGTTGGGGAACTTGGCTCAGAACTCACCAACCACGGCGAGAG
TGCAGACAAAGTATTCAACTTTGGAGTGACATCCTCTTTCTTTTCAACCGGTTTAGTAGA
TGCAGCTTGTTTTGTTTGTTGGTTTGGTTCTACAACCACTATAGACACGTAGGCTGAGTT
ATTCGGATTAGCAAGGGTTGGCTCAGTTAAGATTTTCGGTGAATTAGGTCCTGATATGTT
ACCATTTTTAATTTCATTTGTTATTTTAGTATCAATCTCTGGAAGTTTCAGACCATTGTT
TCCTTTTAAAAGTTTTGAAATTTTAGTTTCATTTGATACAAAACTATCTTTTGGTTCTAT
TACAGGATTAGTAACTGTAGACAATTTTGAATCATTTTGATCTATCAAGTCAGGCTCCGC
ATCCATAATGTTAGACTTTTGTGACTTTGCACTACTTTTCCTCGACAAAGCATCAGCATC
TGGCACTGGAGAGACAGTTGCAGTTTCTGTAGAGTTGTTATGTGCCTCATCATTGCCTTC
TGAAGGAGTCACTTCAGATTTTGTACTGTTTTGTTTTTCTCTTTCCCTAAGAACATGACT
TTGTCTCCGGGCAAACCTTTGACTTGGTCTTCTTTCAAATTGGACAGTACGACGTGCACG
ATTCTGTTGTGTTGTCTGATACTCAGTCTTTCCAGAATACTGGAATCTTGAACCCATTCT
GAAGAAATTTTGACGAGCTGATGGACCTTTGACTGGTGCTCTTAGGCGGAAAAATGTGTG
ATATTCTACAGCACACTTCCAAAGATGTTTACAAGCTTTTTCATTATGTAAACGAAAAAC
AAATGTGTGCTCCTGTTCATGGCCTTGATCATCATCTTCTACAACAATCAGTGTTAGTTT
CTTCTTCTTGAAATCCAACTTTGTAATCTTTGGCCAAAAGAAGAGACCAATTGTTTGTTG
TGCTTCAAATACAAGTATCCCAGTAGGGGTTAAGCCAAGACGATATTCACATCCATCCTT
TCCCAGGACAATGTGCATGTCAACACCATACATTTCAAGCCATTTTGCTTTATTCAAATA
GTTAACTTCAGCTTGTGCTGGAGTTAGACCTTTGTACTTCTTGTATTCTTCCAAAATCTC
AATTTCCATTTCCTCACTTTGATTGGGCACAAATCTAAATTCTGACACAGTTGCTGGTGT
GTGAACAGTCTCATCAAAATCTCCTAATTCTGATTGTAAGGCTAAAGCAGCCAATTCCAC
TGCAGTAGAGTTAGGACATTGTACTCTACTTTCTAATAAATCTTTCTTAAGTTGTAAAAA
GAATTGATATCTAGTAAGCTCTTCACGGAGGTTATTAGGTTCAGATGAGTAAAATTTAAC
TCTCAATCTGAGAGTGTAAGGAGGTCCAATCTTTATCTGTTTTTTTATTGTTTTTGTGGG
ATCCAACCAGTGTTTTACATTATTTGTATCAGTGAATTGTAGTCCAAAGTAATCTTTTTC
TATTAAATCTAATGAATAAAAAACTTGTTCATAGAGTTCAGCAGCACTTGATTTTTTTGA
CAAATTTATAGTTAGATCTGTGTCATCCAATAATAATACTTTACACTGTATTAGATTCTT
GTTACTGCCACTTTTTTGGCCTTGTTTGTTCCGACTTTTGCTTGAAGAACGCCCTCTTGT
CAAAAACTTCAACATTTTCACAAGTTTTTCTCTCAATAGCTATAATTTTAATTATTTCAC
AGTAAAATCTAAATTAATGAAAAACTTTAAAAAACATAACACTTGCATACGAAATTGGCA
TTTTACAAAGTTGGGATTATGGCTGTGGTG
(2190 bp)

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