SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23299c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_ZNRF2_isoform_X2_[Papilio_polytes]
Ontology
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030054 C cell junction
GO:0042734 C presynaptic membrane
GO:0045202 C synapse
GO:0046872 F metal ion binding
Transcript
Level		FPKM:31.70 TPM:31.06
ORF EntryO_TrvaFAMAMG27282_complete:A_TrvaFAMAMG_TR23299c0_g2_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTAAAATTTAGAAACAAATCATTTATTTATCAAGATGA
AAAAGATCAAATCATAGAATACAATTAACGATAAGCTTAGCTAGGGTAGATATGCGACCA
GTAGGGTAGTGCCTGCACCGACCCCGCTAGTCACACCACATACAAAACAACACTATAACA
ACTATCTTTACAATAAACTATACGCGTTAACAACTAAAATATTACTAAATTATAAATAAA
ACACCGAAATATTCCCAAATTATCATTAAATTTTCGTTTTTCTATAATTGTCTTTGTTAT
TTTTTTTTTGTTAATTAAATTCATTATATGGTAAAGATCTCACTAGCATAAGTTTTTGTA
TTTACAATGCCCGGCGGGCGTCACAGTCTATGCGATATATATTCAGTCGCGAGTCACACA
TACACACACACACGCACGCACTAGTCGCCGGGGTGCTCGGGACACGATCTGTTCACCTCG
AACCATTGATCTATGCATCCTTTATGGTAGATGCAGAGGCAGGGTAGGCGAGCGATGGTG
TCGCCCGCGGACAGCTCCTCGAGACAAATCACACACTCGCCCTTTGCATCGCTCAGGACG
TCCTCATTGTATGACAGACGCGGCCTCGTGAGACACATCACGAGATGGCACTCGATATCG
TCCGGGAGCACAAACTTGCTGCAAACCGGACATTTTATACCGATTTCTTTTCTAGAATAA
TTCCTCTCGCCGTTGTGAGAATTTGTAGTTCCGAATGCTTGACCCATCTTGTCGCAATAT
CACAGCACTGAGATCACAAAAAAGGTAAACAAATTTTTCGCACTTTATTAAAATGCTCGT
TATAACATTGCACGCGTGCACTACGCTCGGAGTTGAAACGCCGACTGAGTTCGCGGTACT
TCGCG
(905 bp)

- SilkBase 1999-2023 -