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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23279c0_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		R2D2_protein_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0008298 P intracellular mRNA localization
GO:0010494 C cytoplasmic stress granule
GO:0016020 C membrane
GO:0030425 C dendrite
GO:0030529 C ribonucleoprotein complex
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0044297 C cell body
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0046726 P positive regulation by virus of viral protein levels in host cell
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.53 TPM:3.46
ORF EntryO_TrvaFAMAMG27173_3prime_partial:A_TrvaFAMAMG_TR23279c0_g3_i1
Sequence
(Nucleotide)
CCAAATTGACATTGGCATTTGGCGAATCGTTTTTCAACGAAAGCCATAAACAAAAGAAGA
AAATACCAAAAGTAAAACATACCAATTCAACAACATTTATAAAATATAGCTTTCAATAGC
AAATAGTTTTTGCTAACTTTTGGTCGTTTTGAGTCGTGTCGTAATTTTTGGTAAAGTTAG
TTTTAATTTACTTTTACTAAATATATAAAGCAAAACCTCAAAAAAAATAATTAAATAGAA
CATTTAACAAAAAACATTTTATCTTGATTGCAACAAACTTATCCCAGTGTGGAGTAAAGA
TGAAGACCGCCATCACTGTGCTGCAGGAAATGATGATGAAATTGAGCCAGATGCCCGAGT
ATGAGTGTGTTGATCAGTCGGGACCAAAACATCAGGCGACGTTTGAATTCCGGTGTTCTG
CACTGGGTGAGACAGTGACGGCCATGGCGCGCTCCAAGAGAGAAGCCAAGCAGGAGGCCG
CCCGCCTCATGCTGCTGAAACTCTCGGCCGCGGGGCATCGCGTCCCTCCTCCCTACTCCA
CTGAACTCGCACAACCTTCTCATAGCAACGCGCCGTTGAGCAACGAAGGCGCAGCGGGGG
CGGTGGACAGCCGCAGCTACGTGGCGCTGCTGAAGGAGCTCTGCGAGGAGTACAAGCTGC
CCGCCGTGCAGTACACGCTGGTCGCGGACACCGGCCCCGCCCACCTGCGACACTTCACCA
TGCGCGCCACCATCGGCCTGCACGCGCGCGACGGCACCGCCACCACCAAGAGCCTCGCCC
GCCAGCGCGCCGCCGCCGACCTCTACGCCTTCCTGCGCGTCAACCTCGCCCGCCTCACGC
ACGACTTCGTGGAGGAGCAGGCGCTGGTACGGGCGCACGAGCGCGCCATGGAGCGGCTGG
CGGATGCATCGCCGGCGCCGTGGAAGCCGGACCTGGCACAGCGCGTGTCGGACTACCACC
GCGGCCTCGTCA
(972 bp)

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