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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23272c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_putative_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_DHX16_[Papilio_polytes]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:4.90 TPM:4.80
ORF EntryO_TrvaFAMAMG27150_complete:A_TrvaFAMAMG_TR23272c0_g1_i1
Sequence
(Nucleotide)
GTATTTTTAAGTAGGTATTGAATTGTATTATACGTCTAAAATTAACAGAATAGAATTAAT
CTAAGATGGATAAAAAAAGGCGACACTCATCAAGTTCTGATAGTACTGATGATGATCGAA
TTAAGGATTTAAAAGAACGAGATGAATTTGCAAAAAGGTTAAAGAAACGCGACGAAGAAA
AAATAAGGAAAATAGCAGAGGGCAAGAAGTCATACGAAGAGGCCGCAAAGAAGTTAAAAC
TCGAATCTGAAGATCGCGACAAATTGCTGCCTAAACTTCGCGTACAATCTCGCCGAAAAT
ATTTAGAAAAAAGGAAAGACGATAAAGTTGTCGAACTCGAAGCTGATATCGCTGACGATG
AATACCTATTTGATGAGAGAATATTAACCAAAAGAGAAAAAGAAGAAAGGGAGCGCAAAA
AAACTTTATTACAACTTGCAAAGGAACATGAAAAAGCAAGAGAATTGGAAAATGTTCAAA
GATATCACATGCCTCGAGATTTGGGTAAAGGTGAAAAAGGTGAATATGTTGAAGTGGATG
AAAATGAAAAGTTGCCACATTCAGAGCAACAGAAATGGGAACAGGAACAAATCAAGTCTG
CATTCTTTAAATTTGGTGCAAAGGATGCAAAAGCAACAAATGAGTATGATCTGTTATTGG
ATGAACAAATTGACTTCATTCAAGCTCTTAAAATGGAAGGTGATAATGATGAAAAAGAAG
AACCTGAAATATCTGAATACCAAAAGATTCGCATGACTATTGAAGAAACAAAAAAATCAC
TTCCCATTTATGCATTCAAAGAATCTCTAATTGAAGCCATTCAAAATTATCAAATCTTGA
TAGTAGAAGGAGAAACAGGATCAGGAAAAACAACACAAATACCACAATACCTTCATGAAG
CAGGATTTACTAAAGATGGTAAGAAGATTGGATGTACACAGCCAAGAAGAGTAGCAGCTA
TGTCAGTTGCTGCCAGAGTGGCACAAGAAATGAATGTTAAGCTCGGAAATGAAGTTGGCT
ACAGTATTCGATTTGAGGACTGCACATCTGATAGAACTGTAATAAAGTACATGACAGATG
GTACCCTTCATAGGGAATTTTTGTCTGAACCTGATTTGGCTTCATACAGTGTCATGATTA
TTGATGAGGCTCATGAACGAACTTTACACACAGATATATTATTTGGTCTTGTTAAAGATA
TTACAAGATTCAGACCTGATCTCAAATTACTTATATCTAGTGCTACATTAGATGCAGAAA
AATTTTCATCGTTTTTTGAAGAAGCTCCAATTTTTAGAATCCCTGGTAGAAGATTCCCTG
TGGACATCTATTATACGAAAGCACCTGAGGCAGATTATGTAGATGCATGTGTTGTTTCTG
TACTACAAATCCATGCCACACAACCTCTTGGCGACATATTGGTATTTTTAACAGGCCAAG
AAGAGATTGAAACTTGTGTAGAAATGTTACAAGAGAGAACAAAACGAATTGGCAAAAAAA
TTACGTGAACTTTTAATTTTACCTGTATATGCAAACTTACCTAGTGACATGCAAGCAAAA
ATTTTCGAACAAACTCCTGAAGGAGCACGAAAAGTTGTTCTTGCAACCAATATTGCTGAA
ACTTCACTCACAATTGATAATATTATATATGTTATAGATCCAGGTTTTGCCAAGCAAAAC
AATTTTAATTCCAAAACTGGTATGGAGAGTTTAATTGTTGTTCCAATTTCAAAAGCATCT
GCCAACCAAAGAGCTGGAAGAGCTGGTAGAGTTGCTCCTGGGAAATGTTTCAGACTATAC
ACAGCTTGGGCATACAAATATGAATTAGAAGACAATACTGTACCAGAAATTCAGAGAATT
AACTTAGGAAATGCAGTTCTCACTTTGAAAGCTTTAGGTATAAATGATCTCATTCATTTT
GACTTTTTGGATCCACCTCCACATGAAACTTTAGTCTTAGCTTTAGAACAACTTTATGCA
CTTGGGGCACTCAATCATCATGGAGAATTGACAAAAGCAGGCAGACGGATGGCAGAATTT
CCTACAGACCCAATGCTTGCCAAGATGTTACTTGCCAGTGAAAAATATAAATGTTCCGAG
GAAGTTGTTACAATTGCAGCAATGTTATCAGTAAACAGTTCTGTGTTCTATAGGCCTAAA
GACAAAATAATTCATGCAGATACAGCAAGGAAAAACTTTTTCCATCATAAAGGGGATCAT
TTGACATTGATGAACTTGTATAATCAATGGGTAGCTTCTGATTATTCAGTTCAGTGGTGT
TACGAAAATTTTGTTCAGTACAGATCAATGAAGAGAGCTCGAGATGTCCGTGAACAATTA
GTTGGTCTCATGGAAAGAGTAGAAATTGAGATGGTTACTAGTATATCTGATGATACCAAC
ATTAGAAAAGCCATCACAGCAGGTTACTTTTATCACATAGCGAAGTTTTCAAAAGGTGGA
CATTATAAAACCATAAAGCATAATCAGACAGTCATGATTCATCCTAATAGTGCTCTATTT
GAAGACCTACCAAGATGGGTGATATACCATGAACTTGTTTTTACATCAAAGGAATTCATG
AGACAAGTTACAGAAATTGAAAGCAAATGGTTATTAGAAGTAGCACCCCACTATTACAAA
TCAAAAGAATTAGAAGACTCTACTAATAAGAAGATGCCAAAAACTTTAGGCAAATCTGCT
ATAGTGTAATATATATATTTTTTAAGTCTTAGTCCTTTTATTTCATACTAATGACTTATG
ACCTTGTAAAGTTGTATTAAAGGTAGCTTCTAAGTAGGTACATTGTAGAGATCCATGAGT
GACTTAATTTACGATCAAGTGGCCAGTTTATGTTTGCCTACATGGCAATAAAAAAATATG
AAAAAAAACTGAATATTCAATTTGGCGTCTTATGGTGTGCACCAAGTTGGCAGGCATACA
ATGTAATTTAATGTTTTTGAATATGTCAAAAAATTGCCCCTAAATTGGGATAAATAGTGT
TAGTATA
(3007 bp)

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