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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23263c0_g5_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATPase_family_AAA_domain-containing_protein_2-like_isoform_X4_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003682 F chromatin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0042393 F histone binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:4.40 TPM:4.31
ORF EntryO_TrvaFAMAMG27120_5prime_partial:A_TrvaFAMAMG_TR23263c0_g5_i1
Sequence
(Nucleotide)
ATAAAGAGCAAAAAAGCGGAAGGGAGATATTTGACAACCTTTATATAACAACTAAGTCAA
AGTTGTTAGGTCGGGGTGTGTCCTAAAAAAACAATACTGTTTTTCAGACAATTCATATAA
AATTAATTTTCAATGAAACCTTCCGAATTTTGTTCAATTTTCAAATATCAGTCTTAAATA
TTGTTTAAGCTAAATAAAAATATATTTTACAAATTTATTATTCAACTAAGTTTCATCAAT
GTAAGCAATATATTTTTTGTGGTTTTATCAACCAACAATTTGGCTGATTAGGAATGCTGT
CACTAAATAGATTAAAAAGTTTTATAAATAATACGATTATATTTACAAATCCTTCGGCAA
CTTTCAATTTAATACTCCGGACGTTGACGCGCAGAATCTAACCAGTAAAATAAAGCTAAT
TTTTATCAATGTAATGTCAAATTAATTGTTCTGCGCGACAATAGCTTATCAAAACCCTTT
TCAACCTTACATTAGATATTAACATTCTCACTTTTTCTACTAAAAATTATTGAGAGACTG
GAATGTTTTATTCCAAAAACAGTTGATACTCATTCGTAAACAGACTCGTTTTAAATCGAC
TAATCGTATAGCACAAACATCGATAAATTCATTTCATATTAGCATCTCCTAGCTACATTC
TTCGATACATCATTTTCACACAAAATTGAATCTAAATTCTGTCAAAACAACAAATGACAA
TCTAGAATTTTCGACTACGTACTTTTGAATTTTAGAACCAATGGCTCTTGTAAAATTAAA
ACCATTTTTTTTTTTTTCATAGAATTCCCTAGACTTTGTCAAGTAACTGGACATACCTAG
TGATGATTTTACTCATATCTTGCGGTAGTTTAGTTCTATCGTATTTGGTGGAATATTCTC
GAACGACCTTGAGTAGTTGCGAGTGTAGGTCGAGTAGCGCCGTCAGTCCGATGTGTCTCA
GCGCCTTCGCGTTCATAAACACAACGTTTTTCAATTCAGTCTTGTTTATCAGTACTTTCT
CTGCTTCTCCGCTTGCTGTCTCTGAACCGGAATTTCTCTTCTTTGGTGATGTTTTAGCTG
TGACTTTTTCAGTAGACTTTGTTGGACTCTCCAGCACGTGGTTGTGCCTGACGGTGATGT
TGCACATGGTGTCGGTGTCGTGTCGCGGTCTCCGGAGCGGCACGTCGTCGTCGGAGGCGG
AGGACGATGACGGCGCCGGTGACCCGTTGGGGAGCGGGGTGGATGTCACCGGCTTGTTCT
CCTTGCACTCCTCGTCGGTCACGCCGAGGACGCTCTGCTCTTTAAGACTCTTCTGTGTCT
TGGGTCGCTTGGCAACCAGTCCCTTGGACCACGCGTTCATGCGCCTGCGCTTACGTTTCG
CCGAGTGAGTCTCCTTGTCACCGTTCTGAGGAGTTCTTGGCGACTTGCTGTCATCGTGGA
GAAGGGAATCTAAGCCTTGGGGTAAATTAGAAGCGGTGTATATAAAATCAGGTAGATCTT
CAGCCTCATTCCCCTCGTCCCGTCGTCGCTTCGCTATCTCCTGACACTCGAGTTCGAAGT
CGCTATCCATCTCGACGTCAATGAGTGCGTGCGCGTGGTCGCGAAGGGAACACGCCTCGT
GACGTATTTGTTTGTCTGATGACGTCCTATCAGGATTGTACTCCAAAGCATTTGCACATA
TCAGATCAATGTCATCTAAGAACTCCTTAGCACAGATGTACTTGTGCATGTCAACCTTCG
TCATCATCGTTTCAAGGTCCATCGGCTGTTTGACGATGTCTAAATAATCTGTAACCTCTT
CCAAATCCACAGGCTTAGTAAACTTGTAGAAACGTCGATTCGAAGCCAGCTTCCTGCAAA
TGTCGCGTAAAAATATTCTCAATTCACGCAATTTGTAATCCTCTTTGCGTTTACGACGAG
ATACTTCTTCTGCACTTTCACGAGGCGGCGGGGGCGGGGGTGCTCTGGGCAACGGTGGCG
GTGGTTCCTTGTCTTCGACTGGAGGTGGATCTAACAACGCTTCAGCTAATATCGGTTCAA
AGAACGACAGCACTTCTGATGCGTTCGGCTCTCTTACACGATACACGCACTCCTTGTGAA
GCGGGAATAATTCTTGTAGCTCTCGAGGCAGGTGATCGTGCGGCAGTGCCGAGGTAGCGA
GCAGCAGCGTGTCGTCTCCGGCGGCGCGCGCCCTCCACAGCTGCAGCAGGAGCGGCGCGG
CCGGACCCGCCGCCAGCGAGCCCCACACCGCCGCCACGTCGCGCACGTACAACACGCAAC
CTCGGTCCGCACGACGGCACTCGGAAAACACCGATATCAAAGCTTGTTCCTGTGTAAAAG
TATGAGCCGAGTGTAAAGTCGACATGCTTAGTTCTTTGACGGTGCAATGTTCTAGTTGTG
CTAGTATTGCGGGCGCTATATGTGTCTCAGCACATTCGCCAGTTATCAACATAGCACTCG
ATGACAGGGAACCGCCAAGCCTGTTCTGGTGCAGGTTGTGATGCGGGAACACATTCCTGA
GCACGTGCATGGCTCCCTCCAGCTGGTTGTGCAGTAACGGCTCTGTGTGCGCCGGCAGAC
GACGGGCGGATAGTGGCGTACTGCGCGCACCCGCCGCCACTAACGTGCGCATGGCTTCTA
ACATGTCTTCTTTACGGACTTCCACATTTTTGGCATCGATAAGCAAGGCGTATTCACTTT
CGTAGACTTGCGGGTAGACGCGTCTCAGAGCTTTTAGGACTGCTTCAGAACATAACGCTT
TCAAATCAGAACCTCCATAACCGCTAGACAGCTCAGCAATATGATCCAGCGTCTCATCAC
CAAGTCTCGGTTGCCAGTCCTTCGTATAGATATGTAGTATCTCCCTCCTGGCCGCGACGT
GCGGCGGTGGGAAGTATAATTCTCTGTCGAATCGTCCTGCGCGACGTAGTGCGGGGTCTA
CAGCGTCGAGACGGTTTGTGGCACCGATTATTACTACTTCGCCTCGATCGCACAGCCCGT
CCATCTCAGCCAGCAATGTCCCGACGACGCTGGTGTGTACCTGCTCCTGCCTCACGCTGC
GGACCGGAGCCAACGCGTCTATTTCGTCGAAAAATATTATCGATGGCTTCATTTTGTTTG
CCTGCTGGAACAATAACTTCAGATGCCTCTCGCTTTCCCCGACCCACTTCTTCAAGCAAT
CAGCTCCTTTCCTCATGAAGAATGAGACCTTCCTTCCTCCCATCAAAGTACATTCATTAG
CAAGAGCTCGGGCCAGTAAAGTTTTTCCTGTACCAGGAGGGCCATGAAACAAAACTCCTT
TAGCTGGACGAGTTTTAAACTTTTTGAATAGATCTGGATACATTAGGGGGAATAAAACCA
TTTCGCGGAGACATTTTATGTGCTCTTCTAGACCTCCAACCGATGAAAACCTTACGCTGC
CATCAACTTCGACTGGTTGTATATCTCTCAGAGCCCTATCTGTTTTCTTGTCATCCATTG
ATTTAGATTTTTGTCTGCCTTTAGTTTTGTTTTTCATAGACACATTAAGATCCTCTTC
(3538 bp)

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