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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23256c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nucleolar_protein_14_homolog_[Amyelois_transitella]
Ontology
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030490 P maturation of SSU-rRNA
GO:0030515 F snoRNA binding
GO:0030692 C Noc4p-Nop14p complex
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0042274 P ribosomal small subunit biogenesis
GO:0044822 F RNA binding
Transcript
Level		FPKM:2.95 TPM:2.89
ORF EntryO_TrvaFAMAMG27042_3prime_partial:A_TrvaFAMAMG_TR23256c0_g1_i1
Sequence
(Nucleotide)
TTTGTGTTGTGGAGTGTGGATTTTAAAATTATTAACCAGGAATTAATTATTAACGTTGTT
TAATGAATTAAAATGGCCAAGGTTAAAAACAAGCGTAACGCGGGACTTGCCGATAAAGTC
CACAATAAGAAAAAAACAGAAATAAACAAAAAGAAAGTCAATCCTTTTGAGGTGCATGTG
AATCGTGAAAAAATCAAAGTTTTAGGGAAGAAATCAAAACACGACCATGGTTTACCTGGC
GTATCACGAGCAAAGGCTATACAGAAGAGGAAAGAAACGTTAGGTACGGAAATGAAACTA
ATGAACAAAACCAACACGTTTATTGACCGTCGTATCGGCGAGAAGAATAATCAACTAACA
GCTGAAGACAAGATGATAGCGAGATTTGCAGCTGAACGAGCGAAGCAGCATAGTAGAAAA
AATATTTACAATTTGGCCGATGATGAGATATTGACACATAGAGGACAAACATTAGAACAG
ATCGAAAAGTTTGATGATCCAAGGTCTGATGATGAAGAGGAAGAAGGAAAAGGATTTGGT
GGTCTAGACGATGACTTTGTCTCGGAAGGCCATTTCGGTGGAGGAATGTTATCGAAAACG
GAATCAAAAGACGGTGCCAAATCACACAAAGATCTTATAGAACAACTCATAGCAGAGTCT
AAGAAGAGAAAAGCGGAAAAACAGAAAGAAAAAGAACAGACATTAGATTTGACGGAGAAA
TTGGACAGCGAATGGAAGGATCTCCAACCGGTTGTGTTTAAACGGGCAAGAGAAGAGTCT
GCTATAGATAGAGTTTTGAATAAGGCAGAGAAAAATGGCATGGATTACGATAAGATGATG
CGAGAGTTGAAGTTTGAGAAGAGAGGAACGCCCTCTGATGCTTTGAAAAGTGATGAGAAA
CAAGCAAAAGAAGAGAGAGAGAAGCTAGAGCAGTGGGAAAGAGAGTTACAGCAGCGGATG
ATGGGAGATGATGAAGTGATTCCCGTTAAAGCTAAACAACCAGCTCCAAAACATAGGTCA
GCAGAAGATCTAGACGAAAACTTTGAATTGGAAGATGAAGCCAATTTCATGTTGGCTTAC
GACAACGATGGAAAACCATTGGTGCCTGAGCATATACTAAAGGATTACTCAGTACCTAAC
GCAAAACCAAAATTTGAAGACGGTGTCTCAGATACATCAGAAGAGGGTAGTGATGATGAT
GATGAAGAAGATGAAGAAAGTGATGAAAATGTAGCCGAAAATTCTAAAAATGATCAAGAA
GAATCAGATAGTAGTCACGAATCTTCCGAAGATGAAAAATATAGTAAAAGTACAAAAAAG
ATGGATTCAAAGAAACATAAAGAGAAAAGTATTTTACTACAATCGGATTCTGATGATGAA
GAAGATGATGATAATATTATAGAAAACAAAAAATCGAAAAATGAAAAGGAAAAATCGGAT
AGTAGTGATGAATCTTCTGAAGATGAAAAAGATAGTAAGACTATAAAAAAGATAGATTCA
AAGAAACAAAAAGAGAAAACTATTTTACTGCAAGTGGAATCTGATGATGATCATGAAAAT
GACGATGATGATGAAAAAGAAGAAATTACAATTAAACAAAATACAAAGAAAGTTGAAAAT
ATTGAAAAGCCTAAGCCAAATGACAAAGTTGAGTCCAGAAAAGAAAATATTTCAAATATA
AGTTACTCAAACAAATCTAATGGACATGTTATTGATGACGATGATGATGATGATGATAAT
AATGACGATGACGATGATGATGACAATAATGACGTAAAAAATGATAAAAGAGATTTCAAT
GATTTTAATGACTTGAAATCATCAAGTGAAAGTGAAGACAGTGATGTAGATGATTCTAAT
ATTGGTACGATTTTCGATATGAGCAATGAAACTGATAATTTAAAGGAATTACTATCAGGC
AAAACACCTTCCCAACAATATTCGGCAGTACAAAAACTTATTAAAACATACGATCCCGGC
TTAGCCGAGAACAATAAAGAGAAACTTAGTCGTTTATTTGCCCATTTACTACAACATATA
AACGACATATTCACAAATTTAAAAGACGAAGGCTCAGTCATAAAATCATTTTTAATATTC
GATAGACTAGTCCCGCTTTTTTTCGACCTGGCAACACTAAATAAAATTTCAACTAAAAAG
TTTTTAATTGACCTTTTGAAAGAAAAACGGGATAGGTACTTGAAAAGGCCTAAGAGAATA
CCAGATATGGACACTTTGGTGTTCTTCAAGTTAATTTCTCTTTTGTATCCGACTTCCGAT
TTCCGGCATCCGG
(2293 bp)

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