SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23243c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_toll-like_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0004601 F peroxidase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030198 P extracellular matrix organization
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
Transcript
Level		FPKM:1.88 TPM:1.84
ORF EntryO_TrvaFAMAMG27019_3prime_partial:A_TrvaFAMAMG_TR23243c0_g1_i1
Sequence
(Nucleotide)
TGCGTCTAGTAGTGTGAGCTCCTGGTCGCGACACACGAGTTCCATCGACGTTTGGTGTGC
GCTCGTCTCGTTGAACACCATCGCCATCCAGTAGTCATGGCAGTCGCACGGAAGATGCGC
CGTGAGATGTAACTGGATCTTACTCGAGGATAGATGTTGTACGACATTCTTGCGATGTTC
CTTATTCTTCATATATATTTTACTGATGTTTGCGCCGCTGAAGTCCACTGTATACTCATT
AACCTGCGATGATGCCGAGCGTACGAACTGCATGTCCAGATATGAGAGGGAGGTAATCTT
TGTGTTTGTGAGTTTGAGGAGAGCGAGGTGCTTCATGGAGGTGCGCCAGTCGGAGCATAC
TCGCGTCACGGAGGTGTCCGACAAGTCCAGCTGTTGCAGGTCCACCAGCGACTTCAGCGA
CGACTCACCTGGATCTATAAATAAAGTGGTGTCGGAGCAGAGATCAGTGATGGATGGGTT
GCGAGACAGGTCCAGCACCTTCAGGGAGACGAGTCTAGTCAGCCCCGACGCGACCTCACT
CGTCAGCAAGTTCCTTGACAAGTCCAGACGTTCCAACTTCACCAGGTTCCGGAACAGCCC
GCTGGGTAAGCTTTGAAGTTCATTGTTGTCAATTCTCAATTGAGTTAACTGCGATGTATC
TTTGAATAAATCTTTGGGCAGCGATTGCAAGTGACAATTGTACAAGGTCAAGGTCTGCAG
AGATGTAGCACCTCGGAACACCTCGGAGTGCAGGTCCAAGACTACCGCGTCGACGAAGAG
GGTTGTGAGTCGCGGACAGTGTGCCACCCAGCGCGCCGGCAGCCGCACCCGCTGCTTCCA
CGACCCGTGGAGCAGCAGCGTCTCCACCGAGGGACACGCGCTCCACACTTCGGAGCTGTT
CCAGTTGAACTGCACCAGCTCTCGCAGGGACGGAGGCCTCCACTCGCTCGGGAAGAGCAG
ATCTAGCGTATTAATATATAGTGAACTCAGTGAGCTCGCATTTTGTGCCTTCAATGTTAT
CGAATGTTTTCCACTGATTTGAACGTCAGTCAAACTTTGAAAACCATTCAAGTCGTACTC
GGTTAACTTGACGTAGTCGAGTTTCAGGTGTTCTATTTGAAGAGGGAACTTGTTGATCTC
ACTCGGAGTCAATATGAGATGTTTCAGGTACAAAGTTCTGAGTGCGGTGAGAGATTGCAG
TGCATCAGACTGGAGATGGCCGTCGTTGCCGGTTATCTCGAGGAGGACGAGGTGCTGCAG
CTTGTCGAAGTGGTGAGCGCTGAGGTCCCCGGCCATGTCCTTGATGATGAGTGCCTCCTC
CACGGATACGTTGAGCGCGAGGAGGGCGGCATGCAGCGAGGCGGAGGGCACGTCGCACTC
GTTCAAGGTCACGTTGAGCACCGCCTCGAGCCGCGGGAAGCGCGGGTACTCCGGACTCTC
CAGCGTCACTCCCTCAAGGCAATACAGCTGTATGTACTCGCTCTCTTTGTACAGTATTGA
TATATCCTGACCGTTTATTGAGTAGGTGTTGATTCCTCTAAGGCCGGTGTCGTATATCGT
GCAGCCGTCGGAGAGGCAGCGAGGAGCTTCCATCTCGGCGCACACACACACGCACACACA
CACGACCAGCACGCACACACGCACACACACATACATACTAGACGCGCCGCTGTCGACTGA
CTAGTCTGACGAGATGGATCACTGCCCTACTGCTCCGTGAGAACATACTCCACCACCTAC
TAGATAGCGGAGCTGCATTGAAGAGATCAATGAACGACGCTGACCTCGTACAATATGATG
GTCCCTTGCTTCTTCTGTTTACATTCAAATAAAAACATTATGTACGTCACCTTATATATA
TTATATATATGTGCTTCAAATTCCATGACACATCACTCTCGACGAACCGATATGTACACT
CACTGAACTAGCATATGATATTATTACATTTAACACTCGTTAATTATATGCAAGTAAATA
TATATAAACTGCATGATGACTTGTTTCAGATATTGAACCACGCCTGTCTAACCTCTTATC
GATATAATCTTCAACGAATAAATAAAAAACACTGGTTTATAA
(2082 bp)

- SilkBase 1999-2023 -