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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23238c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DNA_mismatch_repair_protein_Mlh3-like_[Amyelois_transitella]
Ontology
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0000795 C synaptonemal complex
GO:0001673 C male germ cell nucleus
GO:0003682 F chromatin binding
GO:0003696 F satellite DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005712 C chiasma
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007130 P synaptonemal complex assembly
GO:0007131 P reciprocal meiotic recombination
GO:0007140 P male meiotic nuclear division
GO:0007144 P female meiosis I
GO:0008104 P protein localization
GO:0016887 F ATP hydrolysis activity
GO:0019237 F centromeric DNA binding
GO:0030983 F mismatched DNA binding
GO:0032300 C mismatch repair complex
Transcript
Level		FPKM:0.92 TPM:0.91
ORF EntryO_TrvaFAMAMG27007_5prime_partial:A_TrvaFAMAMG_TR23238c0_g1_i2
Sequence
(Nucleotide)
AAATCATAATACTGAAAAAAGTATTTATCATAATTCAAACAATGGACATAACTCCAGAGA
TATAAACGAAGTAGATACGAACGAACTATCAAACAAAGTTGTCCAGGATTCGTTACATGA
GAATGATTTAGCAAATGCAAAACAGTTACAAAGTTCATCAATTATATCTAATTTAGATCC
TATGGATATTTGTGAAACTGTAATGAAAATAAGCGATGAAGATAATGAAATGATTTCGTT
TATTTCTGATTCAAATCTCTGTGACAATATGGTAAAACAAACTGCGCATAATAATCATAA
CAAAGAAACGGAAACAGTTTCACATTATTCAGGTAGTCTCGAATGTCCTGATATTAATAT
TAATTTCATTCAAAATATTAATTCAAGATTACGATCATCATATTTCGATAATCAAATTTT
TGATACGGCTCAATCAGATAAAATGAACAAATACGGCGCTACTGAAAAATACTTTGGTAT
GAGAACTAGATTCCGATTTGTACCTAAAGGTATGTCTCAGATATTCAAAAACTGTAACTC
TAAAATTGATTGCAGTTATAACTTCGATAAGGATTACTTTACGAACAACTTATACAACGA
ATTTGTTAACAACGTTCAGATGAATTCGGAAATTTTTGATCCGATGTTAAAAGAAACAAA
AGATGGTAATGAGAAAGGTATAGAAAAATTAATTAAGAAAGTCAATATGGACAGTGCTTC
CTTAAAATTTAATGCACATTCTATAAAACATGCCAAAGTTTTAGGTCAAGTCGATAATAA
ATTTATAGCTGCCATAGTAATTGGAAACAACCATAACGAAAAAGGAACAACTGAATCGTT
GGTATTGTTTGATCAACATGCTGTTGACGAAAGAATCAGACTTGAGAGAAATATGACAGA
TTACAAAGAAAACGGACAGTGGAAAAAGGTTCCAGTAGATAACATTCTTTTGGTTTTAAA
CAAAGACGAAATACTTTACTTACACAATTACAAAGATAAGTTCTCTCAATTTGGTTTAGA
GTGGGATATATTGAGTAATGACAAAATAATATTGAAGTCAGTACCGAAAGCAATCCCAGG
AAACGTTAATAGACCTTTGGACAAAGTCATGGCCGCTATAAAAAAAGTTATTATAGAAGA
AATCAAGGCTATAAAACTACAAAGTGGTTGCGTTTCTTTGTATCCAAAAGCTATTATGGA
TTTAGTTTTCAGTGAGGCTTGCAGATACGCCATAAAATTTGGAGATAAGCTGACAACAAA
ACAATGTGTAGATATGCTGGATTGTCTGTCTGAATGCAAAATGCCATTCCAGTGTGCTCA
TGGCAGACCCGTTATGGCTGTCCTTATCGATGTCACAAAAAATAATTATGAATATAAGGT
AAATATGGCTAAACTGAAGAAATTCAAATTAAGATTTTGTTGTATTGGTAATAAGTAAGT
GCAATATAAAATAAGGTTAAAATAAAGTCAAATAATGAATAACAACCGTCGTTT
(1494 bp)

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