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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23230c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_maternal_effect_protein_staufen_isoform_X2_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005874 C microtubule
GO:0006810 P transport
GO:0010468 P regulation of gene expression
GO:0010494 C cytoplasmic stress granule
GO:0019894 F kinesin binding
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030544 F Hsp70 protein binding
GO:0031965 C nuclear membrane
GO:0032956 P regulation of actin cytoskeleton organization
GO:0034599 P cellular response to oxidative stress
GO:0043022 F ribosome binding
GO:0043025 C neuronal cell body
GO:0043198 C dendritic shaft
GO:0048592 P eye morphogenesis
GO:0051019 F mitogen-activated protein kinase binding
GO:0051489 P regulation of filopodium assembly
GO:0051965 P positive regulation of synapse assembly
GO:0061003 P positive regulation of dendritic spine morphogenesis
GO:1900454 P positive regulation of long-term synaptic depression
GO:1990124 C messenger ribonucleoprotein complex
Transcript
Level		FPKM:6.91 TPM:6.77
ORF EntryO_TrvaFAMAMG26960_5prime_partial:A_TrvaFAMAMG_TR23230c0_g2_i1
Sequence
(Nucleotide)
GGCGGCCGCGCCTGGCTCGGCGAGGGCGCCACGCCTCAGGCCGCCAGGCACGACGCGGCC
GCGCGCGCTCTGCACGACCTCAGGCCGCACCCCCCGCCTGTCGCTGTTAGTGCCGCCGCC
GCTACTACTGCCACGCAGGACGCGAACGCACCGATAGATGAAAACGGTGAAGGTGGTGAT
CTGTTGAACTCTGAAGTTAAGTCGCCGGTATCTTTAGTACATGAAATAGCTCTGAAACGT
AATCTCACTGTGGATTTCGCTGTTAAATCTGAACGTGGACCACCACACATGAGAGTATTC
GTAACAACATGCACAGTAGGTGAGCTGGAGACGGAAGGCGAGGGTAACGGCAAGAAGGTG
TCGAAGCGTCGCGCCGCCGAGTGCATGCTGGAGGAGATGAAGCTGCGCTGGCCCGGAGCC
GCGCTGCGCTGTCGCCCGCCGGACAGGCGCCGGCCGCATCCCGTCAAGAAGAAACCTAGA
AACCTTATCAAGGAGGGCAGCGTGTGCAGCGGCGGTTCGGGAGTGTCGGGAGGCAGCCCG
GGCGGCGACAACCCCATCTCCCGCCTCGCCGTCGCCCGGCACGCCGCCCGCGCGCGCTCC
CCGCACTACGCCGTGCTCGAGGAACGCGGCGCCGCGCGGAGACGCGAGTTCCTCGTGCGC
TGCGACGCGCCGCCGCACTCCGCCACCGGACGCGGACCCAACAAGAAGACGGCCAAGCGA
CGCGCCGCGCACAATGTACTGCTAGCGATGGAAATGTCAACGAACGGTTCGAATGCGAAT
CCCCCCACAACGAACGGAACTGAACTAAGCACTAGTATTTCGAGTGATGGCAGCAAATCT
AATGATGACAAAAAAAACAAAGGTAGTAGACACGTCAGCAAGTGAAACCCGACAACCTGT
ACCAGGCGTTCTACTCATGGACTATCAACAGAGGGGCACCACACAGACACAACATACTAA
CGGTGTAACAGAACCAGCAGTATCAAATAGTCCCAGTAGTACCACAACAACAAACAGCAC
CACATCGGGCACCACGCCCGGCGCCAAGGACCAGCTCATGTATCTCTCACAGCTGCTGGG
ATTCACTGTGCAGTTCTCAGACTTTCCTAAGCGTAATCACGGCGAGTACCTGTCCCTGGT
GTCGCTGTCCACGGAGCCCCCCGTCATGTGCCACGGCGGCGGCGCCTCCACCGCGCACTC
GCACGAGCAGTGCGCCCGCGCCGCGCTCCGGGCACTCACGCTCATGGGACTCGACGCGCC
CGAACACGCCACCGGAGCGACTGCCCCCAGCAAAGCATCAGTGACGATCGCGAACGGAGT
GTCGGAGTGACACGAGCCACGCGTCACAAACACTGGCTTGGAAGGTCCGTCTGTTAGCTT
CTTACTCTGTTCTCTTGTTGACTCTATACCGATGTTTATGTCCTTTTTCAAGAGCGTCTA
ATATTATTAGTAAAATTGATAATACAATACCATTTGATCTCGACTTGTTAGTTAGAGTGA
CTGTCTCATTTTTTAATAATATTTTTGTCAAATAAAATGATCTGTCGACGTAATTTTTAG
TTTTATGCAAATCATTTTCGATTGCGGAATGGAATCATTTGTCGAGAATGGTTAAGGTTT
TAATTTTTGACATTTGAAATAATTATTTATGATTACAATTTATTGAACTAGACAATTGAG
ATTAAACAATTATAATTAATTATGAATGGAATATCGGTGTTTCTTCACTCAACTTGTATT
GTTATGTATCCGTGTATCGAACGGGCGGTTCGCTGCCGTCTCTACGAAAGCTAACGTTCC
ATCATGCGGCCATGGTGACTCTTTAGTTTAGCTTGTAGTAACAATCGCCGTAATCCTTGT
AGTTTAGCGTTGTATAACGTAGGAGTTTCTATATATCAGTATTGTATCCGCGATCGCATA
TTTATTATTTAAGTACGAACTAGGGGTACGGCGATTAGACGGCGTGGCCTCGATTTTAAA
TTGACTACACTAGTGGTCGATGTTTCCGACCCTAGTCTTTGAAATGTGTAATTGTAGATT
AGTGTTTTATGTAGTCGACATTCTGACGAGTGTAGTCGACACTGCACTCGTTAGAGGAAG
CGGTAGTAGCTTGACGTCTGTAATCTGTGCGCGTGATCATTGCGATGTTGAACAACTCAT
CTCTATTATAATATAAAAGTTTTATCGAATGTTTTTCTGTATTGTATTGTTAATGTTTTG
TCCGACGTTGTTGATCGGTATCGGAAATTTGACATTTAGCCGATAAATCATGTTTGTAGC
ACATACTTTGTTGATTGTACATTTCAATGTAATGGGTCATTATGATCGAATTTTAATCGA
TTTCGCTGAGTTGAATCGATTCTTTTACAATGTAGTAAAGTTCTCGTTCTACTCAGGAAA
GGAAGTTATTTGTAATAATTCCATTTAATATTTTAAATCGAGGCCATCTAAAAAAATTCT
TAACGTTTCAAGTTGCACTGTTGACTTGCCGTTAAGAAATTATTGATGAATGTATGTTAA
TGTGAAGTCGAAAAGTGTTTTTATTTATTTGTTTAAAGTAACTAATACATATTTTATTAT
CATATGGGAGAAATGGGTCCCAATCAAACATGCGCTTTTAGCAATGTATTTTAAGGAAAA
TAATAAAAAGTTGAAACAAAAAAAAAA
(2667 bp)

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