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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23227c0_g2_i3
Scaffold_id
NCBI non-redundant
(nr)		DNA_polymerase_delta_catalytic_subunit_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008310 F single-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0043625 C delta DNA polymerase complex
GO:0045004 P DNA replication proofreading
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.62 TPM:0.61
ORF EntryO_TrvaFAMAMG26946_5prime_partial:A_TrvaFAMAMG_TR23227c0_g2_i3
Sequence
(Nucleotide)
TTTTACTCTAAATAACTGTTGTACACTAACGTTTAAAATATCCACAGACAAAATGGATAA
GAAGAAAAGTTTTAAAGGTCCGCCGCCAAAAAGGTTTAAGTCTGGTGATGATGATGAAGA
AAACGAAACACCATGTAGTTTTGAAGAGCAACTGGCATATATGGACACAGGTGATTTCGA
CAGCAACGAAATAATTGAAGGAGACGGTCCCGAAAATCAATCTACGAATATGAAGTGGTC
TCGACCTCCACCGCCTCTATTGAATCCAAGAAAAGATAAACTAGTATTTCAACAACTAGA
CATTGATCATTATTATGGCAAACCAATGGATGGCATGCCTGGTTCACAACTAGCTCCCGT
CCCAATAATGAGGATGTATGGAATTACTTCAGAGAGTAATTCTGTTTGTTGTCATGTGCA
TGGTTTCACTCCATACTTTTATGTAACTGTTCCAGCTAATTTTACTGAATCATCTTGCAA
TGAAATGAAAACAAACCTCAGTAAAGTTATGTTAGAAGATTTAAGAGGCAACAAAGATAA
TGTCAAAGAATGTGTTCTTGAAGTACGCTTAATACAAGCCAAATCTATAATGTATTACAA
AGGTGATTCAGATATAACATTTGCAAGAGTTTCAGTAGCATTACCAAAATTAATTGCTGC
TGCAAAAAGATTAATTGAAAGGCAACCCACATCTTTTGGATTAATGGATCCACGGTTTTA
TGAGACCAACATTGACTTTGACATTCGTTTTATGGTTGATACTTCTGTTGTGGGTTGTAG
CTGGATTGAACTGCCTGCTGGGAAGTGGTATATGAGAACAAAGGGTTCTCAATTAGCACC
AGAATCCAGATGTCAAATTGAAGTTGACATAGCTTGGAATGATTTTATATATCATCCACC
TGAAGGAGAGTGGTCCAAAGTAGCACCATTTAGGATACTAAGTTTTGATATTGAATGTGC
TGGTAGAAAAGGAATATTTCCAGAACCTAAACATGATCCAGTCATACAGATAGCATCAAT
GGTCATCAGGCAAGGGGAAACTGAACCATATTTGAGAAATGTATTCACATTAAACACATG
TGCACCAATTGTAGGATCACAAGTTTTAAGTTTCCAATCAGAGTCAGAGATGTTATCCAA
GTGGTCAGATTTTTTCCGTGAATTAGATCCTGATATCATAACTGGATATAACATTAGCAA
TTTTGACTGGCCTTACCTTATAAATCGTGCAAAACATCTCAATGTACAGAATTTTGATTT
TCTAGGTAGAATAAAAAACATAAGATCAGTTATAAAAGATACAGTTTTACAATCAAAACA
GATGGGAAGAAGAGAAAATAAAACAATAAATTTTGAGGGAAGAGTCCCTTTTGATCTGCT
ATTGGTCTTAGTTCGTGATTATAAATTAAGATCTTATACTCTGAATGCTGTCAGTTATCA
TTTCCTACAAGAACAAAAAGAAGATGTACACCACAGTATAATTACAGATTTACAAAATGA
AAATGAGCAAACTAGAAGAAGATTGGCAATGTACTGCCTTAAAGATGCTTACCTACCATT
AAAACTTTTGAATAAATTGATGTGTATAATTAATCATATGGAAATGGCAAGAGTAACAGG
GGTTCCTTTGCTCTGTTTGCTGACTAGAGGGCAGCAAATTAAAGTTGTAAGTCAACTATT
ACGTAAAGCAAAAGAAGCCGGATATCTGATGCCAGTATACCATAGCCAAGGATCTGATGA
TCAATATGAAGGGGCCACAGTCATTGAACCTAAAAGAGGATATTATGCTGATCCTATATC
AACTTTGGATTTTGCCTCTTTATATCCTAGTATAATGATGGCACATAATTTATGTTACAC
TACTCTACTACCACCCAATGTTCAAAATAAAATTGATCTTAACAGTGATGATATAACTGT
AACACCTTCAAAGAATTCATTTGTTAAAGCTACTGTCAGAAAGGGCTTACTACCAGAGAT
TTTAGAATCATTACTTTCAGCAAGAAAAAAGGCTAAAGCAGATTTGAAAGAAGAAAAAGA
TCCATTTAAAAGATCTGTCTTAGATGGTAGACAGTTAGCATTAAAAATAAGTGCTAATTC
TGTATATGGATTTACAGGAGCACAAGTGGGGAAATTACCATGTTTGGAAATATCAGGCAG
TGTAACTGCATATGGAAGAACAATGATAGAATTTACTAAATCTGAAGTAGAGAAAAAATA
CACCAAGGCAAATGGATATAAAGAAGACGCCGTTGTTATATATGGTGATACAGATTCTGT
GATGGTTAAGTTTGGAGTCAAAACATTGGAAGAAAGTATGGAATTAGGAAAAGAAGCCGC
AGAATTTGTAACTGCAAAATTTGTCAAACCAATAAAATTAGAGTTTGAGAAAGTATATTA
TCCTTATCTCCTGATCAATAAGAAAAGATATGCTGGCCTTTATTTTACTAGACCAGATAA
ATATGATAAAATGGACTGCAAGGGTATTGAGACAGTCAGGAGAGACAACTGTCCTCTTGT
ATCAAATGTAATGAGCACTTGTTTGCAAAAGTTGCTCATTGATAGAGACCCAGATGGAGC
TGTTAATTATGCTAAACAAACCATAGCTGATTTATTATGCAATCGTGTAGATATATCACA
ACTTGTAATAACAAAAGAACTAACTAAAAATGATTATGCTGCTAAACAAGCTCATGTGGA
ATTGGCCAAGAAAATGAAAAAACGTGATGAAGGAACTGCACCAAAATTAGGAGACAGGGT
ACCATATGTTTTATGTTGTGCAACTAAAAATACACCTGCATACATGAAAGCTGAAGATCC
TATTTATGTATTAGAAAATAGTGTGCCCATTGATTTTAATTATTATATGGAAAATCAACT
TTCTAAGCCACTTTTAAGAATATTTGAACCAATACTTGGTGAGAAAGCAGAATCTCTTCT
TCTAAAAGGTGAACATACCAGAACTAAAGCAATGGTGACATCTAAAGTTGGAGCACTTGC
TGCCTTCACCAAAAAGAAAGAAAAATGCATTGGCTGTAAAACTGTTATGCCTAGCGATAC
AAAGAAGGCATTATGTGATCATTGCATGGAAAAAGAAGGCCAATTATATATTACAGAAGT
ATTTAAATTAAGACAACTTCAAGAAAAGTTCTCTAGATTATGGACTGAATGTCAAAGATG
CCAAGGTAGTTTGCATGAAGAAGTTCTTTGTACCAATCGTGATTGTACTATTTTTTACAT
GAGAAAGAAAATGGGGATGGAACTGGATACCCAAGAAAATACAGTTTTAAGATTTGGGCA
ACCTATTTGGTGATGTTATAATATTGTTATGATGAAAATAAACTAATTAAAACATTAAAA
AAAAAA
(3366 bp)

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