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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23223c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		integrin_alpha-PS1_precursor_[Bombyx_mori]
Ontology
GO:0004872 F signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007424 P open tracheal system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007431 P salivary gland development
GO:0007432 P salivary gland boundary specification
GO:0007435 P salivary gland morphogenesis
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007494 P midgut development
GO:0007608 P sensory perception of smell
GO:0008305 C integrin complex
GO:0009925 C basal plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016324 C apical plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0046982 F protein heterodimerization activity
GO:0048567 P ectodermal digestive tract morphogenesis
GO:0050839 F cell adhesion molecule binding
GO:0050840 F extracellular matrix binding
Transcript
Level		FPKM:13.18 TPM:12.92
ORF EntryO_TrvaFAMAMG26916_complete:A_TrvaFAMAMG_TR23223c0_g2_i1
Sequence
(Nucleotide)
CCAACCATACATACGTTAGACTGCTGTTCTTAAACAATGGACAGTTTCGTTAATTATCAG
TGTGAAGAAGTATGGGATCAAAGGAGTGTGTTTGCGAAGCCCTATGGCGTAGATGTACCG
GCCGTAAAGCAAAGGTGCCAAGCAAATGCACGTGAAAGAGATAGGACACAAAATGTCAAC
ATGGCGTTCAATACACTACGTTTGCTGATCCCGACGGAGCCTCCAGACAGAAAACTCAGC
AAGATCGAAATACTTCGACTAGCGGGGAGCTACATCACACATCTTGATAATCAACTTTAC
ACTGGAGACGTGGAACAACCATGTTTACAGAAAAACGATACGGAAAACAAGAATACTACA
TTGTGTACATTTTGTTGGACTTCACTTAAGAAAGAGGTACTTATGATATCAATTAATTAG
TTTCTCGGTAACTAACACTAAAATATATAGGTACAGGAGGATTAAGTTAACTTTTTCAAT
CGCTCGCAAAATTTGCTGAACTTAGGTTTGCTAAAGGCTCCATTAGATTCTCGTCATTTA
ATAAAATTTATCTTCCATCGTACGATACAAGATTGATAACCATTAATTAATTTTAAGATA
TTAAAAGCTATGTGTTTTATTTCAGAAAATCACGACAACAAAATTGGACAGCTTTTACAA
ATCACCATTTTAAGATTATACTTACCCATGTCATTGCACTATAAGACGAAGTAGACTTCT
TGAAAAGTTACCTTTGGAATACTTTTTTTCTTTTCGTTGTAAAATTTGCACTGAAGATTT
AGTATCTTTAGTTGTAAATATACCTAATATTGGCTAAATAGTTTGTCGTACAATGAAGTC
ATTGAATATGTATTAGAGACTATCATTGTTTTGTAACTCATGTAAAATTCTAATGAACAT
GATAACAGGTAAATAAATAAAACATGTATTTTATCAAAATGGCACAATTTATTCAAATGC
TGTTAAACTGTTAAGTAGGTATTAAAGTGTCGAAAATTGTATAATAATCACAACCAATAT
TTTTATACTCGATCAAAATGTAATATTATTGTAAAAATGTAATAAGTCTTATTGGCAGTG
CGTTTATATAAATTTTGATTACGAAATATAATTTATACTTAAGTACGTGTATATTTACAA
TATTTTACAATTACAAATAGTAGGCACCTAGAAATTTTACAAGCAAAATCGTGTACAAAA
TTATACTACTTACAAAATAGTTTGGTAATGTCAAGTTAATGCTTCGATTAAGTACTTTTA
AGTTTCAAACCGTAGCTTTAGTAAAGCTTCAATAGATGTTTCGAGTCTTCAAACAAAAAT
CGAATAAAAAGTGACAGTTATATATTCTTATATTTTGTTAAAATTTTAATAAAAACGAGG
CTTTGGTCTATTCAAGCTAAGTATAGTATATTTCCTATACCTTTACTTTTCAAATTACGA
ACACTTAACTTCATCTATTGCAACTTTACTAAAGTACTAACAATATAATAAATTGTGACA
TCAACAATTTTATGCGTCCTCGTATCAACCAGACTTATAACAAAATTCTTGACTAGTTTA
ATAATCTAGTCATTAATAATACGCTTAAACTAATCATAAATAATATGGCAATAATTATTT
ACTTCAAATAAATAAACCACGAGATACGATGCAGATTTAGAAAAAAAAATATTTGTTTGG
CTTAAATTGTTGAACGGTTTCGTTAAAGCAAAGTGACCCTTATTAATAACTAAAGTAAGG
TTATAAGTTAATCAGAATTATAAATTAATTGAATATTTTAACTTTAGATTATTTAAGTAT
TTGGATACAATAAAAAAATCGATAAGCTTTGTTTGAAAAATGAATTTTATGAAAGAGACA
ATATTACTTATTTAGTAAAATACATTTTTTCTCTGTATACAAGTTTTACTTTGCATGAAA
AGATCACTAGTAAAGTTAACGATATTGCTATAAAGTAAAATTAAGTACTTCAATAAGCTC
ATCTATTTTTACATTTATCATATCACGTGGTTCATAAATTTAATCAATATATTTACAAAT
ACATAATATAACGCATATATAAACATAAATCAAATAAAACTAAAAATGCATTTATAAAAA
CATGTACTTGTGCTAACATCAACATACGTAAATTTTAGAACATCACATTCACACAGTTCT
CCTCAAAGAAGATATAACATAGCAGGGATAACATCACAGACGGAGATATAAATACGATTA
GTCCAACTATTTACACGATCATAGTCTGTCACACAATAATCTATAGGCACATTTTCGATT
TTAAATTCGCCTATATAATCTGAATATACTGGGAAAGTCATGTGAGTTCATCTTTAGAAC
ATAATAATTTTGAACATTTCATTCTAGATTTAAAAGTATCTTGGCACGTTTTATATACAA
ATAGAGAGTTACTGATTGCCATGAACTTACATAGTTATTTTTTAGACTTGCCATAGACGA
ATTTGAAATTCAAAAGTTACGCCCCAAAACACTTAGCCTCAGCTATCGAATGCTGTTTCT
ATCTCTTCCTATAAAAGGACTGGATTCGTGATGGTTCTTCTCCAAGTTCCCAGACAAAGT
GGGATCTGGACGACTTCTCTTAAAGAAGCCGAGTTTCCAGAGCGCTAGTATTAATAGCAC
TAGGACTATTAATCCGATGATCACAGATATGATGATGACCCATAGTGGAACCTCTGTGGG
CTCACTGATCTTCAAATCTGGATACGCTACTGTTTCAACAGTAACTGTATCATCAACTTG
TTTGCTCTGATGTATATTGTAATGTTCAGGTATATGTATGAAGGCGGTGGAGGCTATGTT
CACGTGACTGACTCGAGGGTAATCCTCGACTAAGGTCGCGTTCCACAGGCGAGCCTTCAC
TGTGATGGTGGTGGCTTGCGCTCGAGCGAGCCGGTATATCACGCATTGAAACTGTATGCA
TTTAGCTGTCTTCTTTTGACAACTCATATTAACAACATGTTTCCTTTGTCCATCTTTATC
TGTATACGCTTCAGCTTTAACTACATCACTATCTCGTTTTCTTCTCACTTTATTTTCTTG
AGCACTAGAATATTCTACTACTTTGCTTTCATTGTGATGTTTCTCGTATGAGTTTACACT
GATTTTACCAGTGCTCATGAAAGGATTGATTTCTAAATTTTCTAAATAGGGTTCGAAAGT
TCCCGGCCTGGATGTGAGGTTCAATGGGTTTATCTCTCTCTCTGTGATGAAACATTCACC
GTTGCTTTGGTCAGCTTCTCCATCGACGGTCGGCACATCTTCAGGGTAAAGCAGCCATTT
CCCCTGCACGTTCTCTGAAGCGACTTGATGCGGCCACAGTATTACAACTTGCACTGATGA
TACACGCCATGGACCCTCATTGAATACCTGATATGTATGCACCACTCTAGTACCGATATC
ATCGAAGTACGTCATCGCAGATTCACCTTTTACGTCGCCTCCGTAGAATACTTGTTCTGG
TCGAGCAGCTCCCTTGATCAACAACTCCGCGTTCTTGATGACAAGTGCTTCGACTTGTAC
CGGAATCTTTCCAGGATACAGTTCCTTGGAAGTAGAGTTAGCCCAAACCGTGAACACTAC
GGAAGGTTCATTGTCTTCCAAAGCTCTGGCGTCGAACCTCATCGTGATGGGAGCGGCTCC
TTCGGGCTGCTTCTTGAAGGGATTCTCCAGCATACAAGATACTATTGTTTTGTTGAAACT
CGTACAGATAATGTTCTTGTCACTTATATTAGCAGCGATGTAATGTAGACTTGAGTGATG
TTGTACAAACAGTTGACTCTCGTACGCTGACTCCCCATAGTTATCGACTGTTATTGATAG
TTTGATTTCTTCTTCTTGTCCTAATGTTAACGCGTAGGCTTTGCCATCTGCAGTTTTCGG
TAGTTGTAAAACAGGATCCACGATTAGATCGCTGACGCAGGTAGCATCCGTTCCACAGTC
ATTCAAGAAGTGAGCGCTGAATGTCGTCATCGCAGTTGCATTAAGTACCGGATAGTCATC
GATATTAGGCAGAACTCCGGAATCTGAATATTTAGGCTCAATGTTCTCCAGCTTATATGT
CACTTGGAATTTTATGGGAGTTTGAATATCTCTCGTGTTATTTTTTATATAAACAATATG
TTCCCTACAATCTTCCACATCTTTATCCAAAGTAATGGACTTTTTAATTTTATTAGTTTT
TTCCGAATCCAAAAACACTCTCGAGAATCTTTTACCGCCTGGGAATGTTTCTGCTTCGAT
CACATAATTTAGTTTCAAAGCATTCGTTTTTGTAGATTTCACTAAAGATTCTATAGTGCA
GCAAGCGTGGAAGTGAAAACATGTGTATTTCGAGTTGGGATCCTTTTCACAGCCTTGCTT
CGTTGGGTCGATATTAATTATAGTATTCGATGGTCGTATTGACGTCTTTATGTCGATGAT
CGGTCTCGTTCGTATTAAAGCAACGCTGCTATTTTCGTAAGCACCAATCAACAAGTCTGG
GTAACCGTTAGCATCCAAATCGATGCCACCAGCTAGTGAGTATCCAAATGTTTTCAATAC
AATCGGTAAACCTTCCGATGTAATAACTTGATCTGGTACTGAGTTGAGTCCAGTTTCTCT
ATTACCCATATAAATGTAAACAACCCCATTTCCTTCGTAAGGACTGCCGATTGCGATATC
TTGACAACCATCTTTGTTGAGATCTGATGCATTTGCAATAGAAATACCGAATTGCGATTC
TTGTTTTCCTGTGAGTTTTAAATCGAATGTTTGATTTAAGTTGTAGTCTTTATTGAGATA
CAAATATACTGCTCCACCTTCGTCACGTGAAAAATAGAAAGGTGCACCAACTAGTAAATC
TGGTAATCCGTCTCCGTTCACATCTGCTACAGCAACTTCATAACCAAAGCTCGATCCAAA
CTGTTCTCCTTTCAGAATGAGTGTAACATGAAGAATATCTAAATCTGTTCTGCCCCAGTC
AGCAGTGTCTTTCTTGCTAAAGATCACAACTTGGCCAGTGCCTTGAGAACGAGGTGCTCC
AGCTACATACGACGGTTGCTTTCCAAAAAACCTTCCACCAGTAACTGACATTCCTAAATA
GCTGTATTTTTCAACTGGACTTGCTCCATCGGCGACAGGAGCACTGTAGGCAACATTGTC
CCGAACGAACATGTCATCTCTCATATCTTGTGCGAATATTGTTCCTCGCCATGCATAAGG
TCCTGGACTTCCCAGAATTAAAGTTTCGTCATCCAATAATGTACTACTTGTACCCACTTG
ACAAAAACCGTATTCTTCATGTTCTCGAGTGATAGGTCTTCCTCTACATGGTTCCGTTAT
TTCGTTGAGTTGAAGATTATTCTTCAAAGTATAGCAGAGTCCTTGGCCAAATTGTAGTTC
TCCTATTTTTCGTATGTACCTGTGGGCACAAACAACTGCTTTCTTGCCAGGACCCTGACT
TCGAACAGACACACCGAGCCATTGACCTTCTTTGATTTCATCTGAATATGGACCTGATAG
ATGATCCGAATCCAGCGTTCTTTTCCCATCTGTTATGATCTGTTCGCAGTCGTTCGTGTG
TGGACTGAGGCCGCATTTCCACAAAGCACCGGACTTCGTTGTGTTCGGCTGCAGATTTTG
ATCGAGAGGAGCTCCCACCAGTAACCAACTAGTTTGAGTGCCGTCTTTATTGAAAGTTAT
GTGTTCAGCTACTGAAAATCCAAAGTAAGAGCCGGCCTCTCCGAACTTTATTACAGGAAT
CCTAGGCTCCAGGTTGAAACCGGAACAATATAAAATGCACATAAATAATACACTAATGCA
CGTTTTCGCCATCGTGTACGCAGTTCGTTTTTCGTTAACACATTCACTGTTAAGTTAATA
TAAACATCGCGTATTTAAAATGTTCGGCGCGTAGAAACAGACCCCCAGCACGATTGCCGT
TCGCCGGCCGAGTACCGCCACCGAGTATACAATTCCCGCACTTTGCTATCTCTGAGTCTC
TGCGCCTATACACGGAACTCG
(6021 bp)

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