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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23182c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
Transcript
Level		FPKM:10.33 TPM:10.12
ORF EntryO_TrvaFAMAMG26787_complete:A_TrvaFAMAMG_TR23182c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTAAATTCCAAATTATATTTAAGTTATCATCTTACATCTAAGTAATATGTAT
TTAATTTCTTAAAATTAACGAAGTGAGTGATCTAAAAATTCTAAAACATTTGTAAATTTT
TACACTATCAATTATTAGAAAAAGCCAATGCAGATTGCATTATTCTTCACGCAAATACAT
TTATAAATCATTTTTTCACACATCACAAGTACGCTTAAATTATTTACTAGAAAAGTCTTT
AACATTGTTCTGTCCATAAGTCGCTGATTTCTTCAATACCTGTTCTTGCTGTCGGATCGG
CTTCGACGGTCGCGTGATCGCGATCGGCGAGGGCTGGGCGATCGACGGCGTACTGACGGT
GACCGACGCGGAGACAGCGATCTACCGCGCGAGTACGATCGACGGCGGGGGCTGCGACTG
CGCGACCTGACGAAAATAACACAATATACACATACTAGTTAACAACAGCCTGAAAACACC
ATCTTTACCTTGAGCCAATAAGTAAGTAAAGATAGTGCTTTCAATTGGCTTTTGATCACG
CTTTTCAGTTCCATTTCTCCTCTGAAATCCACTTCGGTGGAACGCGAAAATAAAGCCGCC
ACGTTTCGTACCACGCTCTTGCATTGCGGTCTCAATACGCTAAAAATAACTCATCATACA
AAAATGACTGTCTTGAATTGTTAAACTAAACTATGAGCCTGAACTCTCTACCTCCTAAAA
TACACCCAAAACACCAACATAATTTAACTAAAATTTAGAAGGTATCAAAGGTAAGGTTCT
AAGTATAGGATTCAAATAGTACCGATACATGGTGGAGCCTGCGCAGATGACCGTTGCGGC
TGCTATGGGGCCGGAGGAAATAATTGAAGGCGAAGTTGGGTGATCTTTGATCTTCCGAAG
GACCGGTGTGGAAAGTTTGAGAGAGATTGCAGTACGGGAAGGTCTGCAGCCGTTAGTTGT
TTGTGGCACGGCGGTACGAGTGCACTCGATGTGTGTTTTACTACGTTATTCGGTGCACTT
GTTGTATCCTACTGTTTAGTTTGTGTTTTCAAATCCAAGTTGAGGTATAATTGAGGATTA
GGTGACCGCAGTGAGTAGGAGTGTAATGGGGACGCTGTCGTAGTCAGCTGCGCGCAGCAG
TTGGGTGAGGCGACCGCAGAAGTCGATCGAGATGTTGATGCAAGCGACGAGCGCGGATGT
CAAATTGGTTAACGAGCCGTAGTTGTGAAGAGATGTGGTGAGGACGTTGGTGTGTTGGTG
GTTTGTTGAATAAATGGACCTGCGATCCCTTCTTGTTCTGCCGTTTGACATCTCCACTCG
AATTCTGGTACCACAGCATCGTGTTCCGTCAAGTCCACGAACTGAATCTTCGGCGTCCCG
TGGGTCTTCAAACTCCACGAAAGCGAATCCCGGAGGATTGCGGGCCACCCATACGTTACG
GATATTTCCGTATTTAGAGAATACTTTTTCTATTTCATATTTGGAAGCGTTTGTACCCAA
GTTGCCGACGTACACCTTGCAGGAAAGGTCCCATTCTCTGTATCGCGACATGCTGTTTTA
TGTAGAATTTTAAAAAGGATAATAAAAATTGCAAAACCACGCACTAATTTTAAGATTTAA
ACTGATTAGAAACGCCTAACCACCACGAACGGCACG
(1656 bp)

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