SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2317c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101736053_[Bombyx_mori]
Ontology
GO:0001843 P neural tube closure
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007368 P determination of left/right symmetry
GO:0008589 P regulation of smoothened signaling pathway
GO:0010669 P epithelial structure maintenance
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0035058 P non-motile cilium assembly
GO:0035869 C ciliary transition zone
GO:0036038 C MKS complex
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042733 P embryonic digit morphogenesis
GO:0042995 C cell projection
GO:0048706 P embryonic skeletal system development
GO:0048754 P branching morphogenesis of an epithelial tube
GO:0060122 P inner ear receptor cell stereocilium organization
GO:0060271 P cilium assembly
GO:0060322 P head development
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0061009 P common bile duct development
GO:1901620 P regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:1903887 P motile cilium assembly
GO:1990403 P embryonic brain development
GO:2000095 P regulation of Wnt signaling pathway, planar cell polarity pathway
Transcript
Level		FPKM:2.31 TPM:2.26
ORF EntryO_TrvaFAMAMG1520_complete:A_TrvaFAMAMG_TR2317c0_g1_i2
Sequence
(Nucleotide)
TTTTCTTTATTTGATCACTATTTTTATGTCTAAAATGACCGGACTATTAATAACAAAAAT
ATAAGTAATACTGATAAGTTTGTATATCTATGCGGCTACATTATTGCGTATATTCGAGTT
GTGGCCAATAGGACACAATAAGATTACATTTCAGCTGCCAAATGCTTTTTGTTACATTCA
TATAAACGAAAATCTATAGAATATACTGTTTTCTTTGATTGAAACACACCATTAAATATT
TCGCTAATCTAGCCTCTGCATTTAAACATTTGATTCTTCTTCATCACGGGTTTCCTGTTC
TTCTTCATCTCTTCTAGTGGCAGCTAAGAGCTTCGCTTTGGCTAGTCTGTACCGCATGAG
GGCTATATCGGCGTCCTGGAAGACGGCAGACATAGCGGTCCCGGCGGCCGGCATGGGCTC
GATCCGGAGCCCGGGACGAGTCTGAGTAAAGATGTTCCACCGCACGTACACCTTGCCTGC
CTCTGCGTGGGTGTAATTAGCATCCATTGCATGCGGGTTTTCATACAGCAGAACAGAATC
TCTGATCAAATGACAGCCTCCCACCCAGTACCGTCGGCTCATTCCTTCATTGCGGTCCAG
ATCTTCGGGCACCATGGCGGTCAGAGTATAATCAACTTCACCTTCCGTCAATGGTATGAG
TATAGAACCGAAACCTTCGGTGCGGAAGTTCTCGGCGTAATCTGATGCCTGTACTTCTAG
GATCACTTGGATAGGTGGTGGGTCAATCGACTCCAAGCAAGTCATGTCCAATTCAAAGGC
ATATCCAACGTTATATGTGTTTTGTCCGTTGACTTTGTACATGGCACTTCTGTGACTGCG
ACCACTAATTATATCGTCATATATCAACTCATCCGGCAGTTTCAAGTTATATTCAACATA
CAAATTGTTCAAGTCGAACCCTTCCATCTTTAGGATTTCGAATTTTACGTAAATGGCCTT
CATTTCGATAGGCGGTCCAGCGAAGTAGATTATGTTTTGGTTGCGTCTGTTCCATCGCCT
CTGCAGTTTCCTTAACATAATGGTCAATCCATCAGCAGCACAGTCATCAAAGTCGATATC
AATGCTGTACTGGTACCCCCAGTGCTCACCCTCAACAGTCTCTACTTCGTAAGGATCCAA
CTCCAGATCGTTGATCTGTGGAGTGACCATCAGATACTTGTGCTTCTTACTGTAACACAG
GCAGGCCAGGCAGGTACGTTTGCGCGAATTCAACTTTGGAGGATCTTCAAAGTATTCACT
GTTATCAAACAGGATATGCATGGTTACATATTTGTCACTCAGCAGGTTAATGTGCTCTTC
ACTTGCGAACAATCTCTGCTGAGATTCAGATGGCTTACGACCAACAAGACTCCTTATCGG
ATCATTCAGTTTTGATTGCCCTGTTTCAGAGTCATAATTTGCAACTTGTTCAGCAAATTT
CTTGACGCAACTGTCTGGTAACACCATGTGTTTGTCATCGTGGTTGCACACAAATAGTTT
ACTGGTTGGAGCTGTTCCCTCCTTCAGAACTTCACAGTATATGGTTTCCGGTTTCATCCA
CCAGCTCGAGTTGGCATCAGGTTTTTTACCGGTACCATATATATCCCATCTCTTTCCCTG
CCATTTGAAGATGTACTCCTCTATCATTTTGCTCTGATGAATGATTCCTGGATCGTCTGG
GTTGTAAAGTGATTTGGGCAATGATGTAACTAAAGTTGTTGGTTTTAATTTTACTCTTAT
TTTCATATTCTCGATAGGGTGTTTGAACCAGTGGACTCCGCTTGTCATATTCTCACGATT
GAGACTAGTCATTTTCTTTTATATTAACAAAATAGTTTTTAAAATATCGAATCCTACAAC
ATCATTAACTATTTCCAGTTTATTCATAAATTCGTTTTGATCAATACTTGAA
(1912 bp)

- SilkBase 1999-2023 -