SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2315c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tyrosine-protein_kinase_Abl_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001764 P neuron migration
GO:0002009 P morphogenesis of an epithelium
GO:0003382 P epithelial cell morphogenesis
GO:0003402 P planar cell polarity pathway involved in axis elongation
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005927 C muscle tendon junction
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007370 P ventral furrow formation
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0007611 P learning or memory
GO:0008045 P motor neuron axon guidance
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008360 P regulation of cell shape
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010906 P regulation of glucose metabolic process
GO:0010977 P negative regulation of neuron projection development
GO:0016199 P axon midline choice point recognition
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019897 C extrinsic component of plasma membrane
GO:0021785 P branchiomotor neuron axon guidance
GO:0030424 C axon
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0031647 P regulation of protein stability
GO:0032880 P regulation of protein localization
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
GO:0045179 C apical cortex
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0046827 P positive regulation of protein export from nucleus
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0070938 C contractile ring
GO:0072499 P photoreceptor cell axon guidance
Transcript
Level		FPKM:7.98 TPM:7.82
ORF EntryO_TrvaFAMAMG1508_complete:A_TrvaFAMAMG_TR2315c0_g1_i1
Sequence
(Nucleotide)
GTTATATTGTTTTTCGTAAATTTAGGAACATTGTAATGTGGTGTAAAACATTTTTGAACC
GCCAGAATGATGACGATATCATAATTAATAGTCATCTAACAAAAGACCGAATAAGAAAGA
AGAGTAGTGTCTGAAACAGAAGTGTAAAATGAAGTGTGATAGGATTGCATATATTAGAGT
GTAAAGCGTGTCGGTAGTGGAGTGCAGAGGCATCGGCAGGCGCGGAGAGCGAGATGGGAG
CGCAGCAGGCCAAGGAGCGCGGCACCGCCAGCGGCGCATCCATGCGCTCGGCGCGCTCCA
AGCCGCGGCTGCCGAAGGACCCCCGCATGCTCGGCTCCAACATATTCACTGAACACAGCG
AGGCTCTGCTGCAGAGCCGGCCGCTGCCGCACATCCCGGACCTGCCCGACGAGGCTGCCG
CCGCTCCCTCTGCTGCGGCGCCGCTGCCGCTCGACGCAGCCAACAGATGGACGTCGAAGG
AGAACCTCCTGGCTCACCACGAAGAGGACGATCCCCAGCTCTTCGTAGCGTTGTACGACT
TCCAAGCGGGCGGGGAGAACCAACTCACTCTCAAGAAAGGCGAGCAGGTGCGCATCATGA
GCTACAACAAGAGCGGCGAGTGGTGCGAGGCTCACACGCTGACCGGCGCCGTGGGCTGGG
TGCCGAGCAACTACGTGACGCCCGTCAACAGTCTCGAGAAGCATTCATGGTACCATGGCC
CGATTTCGAGGAACGCGGCAGAATATCTCCTCTCATCTGGGATCAATGGGAGCTTCCTGG
TCCGCGAATCGGAATCGAGCCCTGGGCAACGCAGTATATCCCTCCGTTACGAAGGTCGAG
TCTACCACTACCGCATCAACGAAGACGCAGACGGGAAGGTTTACGTGACGTCGGAGTCGA
AGTTCGGAACTCTCGCAGAGCTCGTTCACCATCACTCGGTTGCTGGGGATGGTTTGATAA
CCCAATTGCTCTATCCAGCGCCGAAGCGCTCGAAGCCTACAGTTTTCCCTCTAGCCCCTC
CAGATCACTGGGAAATAGATCGCACCGACATCGTGATGAAGGACAAGCTGGGCGGCGGTC
AGTATGGGGACGTCTACGAAGCCGCGTGGAAGCGAGGCAACATCACGGTGGCCGTCAAGA
CGCTGAAGGACGACACGATGGCGCTGAAGGACTTCCTCGAGGAGGCGTCGATAATGAAGG
AAATGCGGCACCCGAACCTGGTGCAGCTGCTGGGAGTGTGCACGAGGGAGCCGCCCTTCT
ACATAATAACGGAGTTCATGTCGCGCGGCAACCTGCTGGAGTACCTGCGCGCCGGAGCCC
GGGACTGCGTGCCGGGAGCCGTGGTACTCATGTACATGGCCACGCAGATAGCCTCGGGGA
TGAGCTACCTCGAGAGCCGCTCCTTCATCCACCGCGACCTGGCCGCGAGGAACTGCCTCG
TCGGGGAGAACCACCTCGTGAAGGTGGCCGACTTCGGCTTGGCTCGCCTCATGCGGGACG
ATACCTATACGGCGCACGCCGGCGCCAAGTTCCCCATCAAGTGGACAGCGCCCGAGGGAC
TCGCCTACAACACCTTCAGCACCAAATCAGACGTCTGGGCATTCGGGATCCTCCTCTGGG
AGATAGCCACTTACGGGATGTCGCCGTACCCGGGAGTGGACCTGGCGGACGTCTACCACA
TGCTCGAAAAGGGCTACCGGATGGAGTGTCCGCCCGGGTGTCCGGCGCCCGTGTACGAGC
TGATGCGCGGCTGCTGGCAATGGAGCCCGTCCGACCGACCATCCTTCCGCGAGATACACC
ACGCCCTCGAACACATGTTTCAAGACAACTCTATTACAGACGAGGTGGAGAAGCAGCTGC
AGGAGGCGGGTGTGAGCACCCCTCACCTCTCGCTCAAGAAGTCGTCCGACCCGCGAACCG
TGCAGATGCGCCGCCCGACCAACCGGCGCGGGAAGCAGGCGCCGACCCCTCCTAAACGAA
CCAGCCTGTTGTCGTCGTGCAGCTCGTTCCGCGAGTCGCAGTACGCCAGCGAGGAGCCCG
CGCTCGACGACGCGCCCGCCTCACTCAACGGGGGCGCAGGTCGCGCGGGTGCGGGGGCCG
GGGCGGGGGCCGCGTCCTCCGAGGGCTCCCTGGCCGAGGGCACGCCCGACACGGACGAGT
CCGCCGGCACCGAGCACCGGCACCGCGCCAAGCGACGACACCACCACCACCACAACGAAC
AACCCGCACACAAGCAAGGCGTACAGGTAGCGGCCCTCGAGGTGCAGAACGTGAAGCGAG
CCATCAACAGATATGGAACGCTACCGAAAGGCGCTCGCATCGGAGCCTTCCTGGAGTCCC
TGCGACAGAGCGGGGGCGGCAACAACGCAGAGACGGCGCGCGCGGTGGCGGGCGGCGGGG
CGGGCGTGGGGGCCAGCGGGGCGGGGGGAGACGAGGCGCGCTCTCTGTCGCCGCGCACCG
CCCGCGCTCAGCCGCACATGATCCGATCAAACTCGTCGGGCGGAGTGACGGGAGGCCCGC
CCTCCTCGCCCCGCGCCGCGCCGCACCTGCGCTCCTTCACCGGCAGCCCCGCCAAGCCGC
GCCCGCGACTCGCCGACCTCGAGTTCCCGCCGCCGCCGCCGG
(2622 bp)

- SilkBase 1999-2023 -