SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23144c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ATP-dependent_DNA_helicase_Q5_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000993 F RNA polymerase II complex binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006259 P DNA metabolic process
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008026 F helicase activity
GO:0009378 F four-way junction helicase activity
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0043140 F 3'-5' DNA helicase activity
GO:0051301 P cell division
GO:0051304 P chromosome separation
Transcript
Level		FPKM:6.94 TPM:6.80
ORF EntryO_TrvaFAMAMG26707_complete:A_TrvaFAMAMG_TR23144c0_g1_i1
Sequence
(Nucleotide)
TTTAGAACTGTAATTTGAGGTTGTTGTTTGTATTTATTAAATTTTACATAAATAATTTGT
GTATAAAATATGTGTTATCTTTTATCTTTAAGTGAACAAATATTTAGCGATATGTATATT
GTTATATTTAAGTGTGAAAAGCTCAGATAAACGTGAAGAAAATGGATCACATAACGGATA
AATTATTACAATATTTTGGACACCGCAGATTCAAAAGTGAACTGCAAGAGCAAGCTGTTC
GTGCTATTACTAGAGGAGTTCATGATGTCTACGTATCTATGCCAACAGGATCTGGAAAGT
CTTTGTGCTTTCAATTACCAGCTATGTTACAAGATAACAAACTGGCTATTGTATTTTCAC
CGCTACTGGCACTTATCAAGGATCAAATAGATCATCTTACAAAACTTAAAATAACAGCAG
AATCAATTAATTCTAAAATGTCAGTAAAAGATAAAGAAAGAGTGTTAAATGATTTGCACA
GTATGAAGCCTAATACAAAGTTTCTTTATATTACTCCAGAACAAGCTGCAACAGAAACTT
TTAAATCTCTTATAGAACACGTTGTGAAGTACAAAAAAGTTTCATACATAATTGTTGATG
AAGCTCACTGTGTCAGTGAATGGGGACATGATTTCCGACCCGATTATCTAAAACTTGGCA
ATTTAAGAGAAAAATATAAATCAATACCATGGGTTGCTCTCACAGCAACGGCCAGTGCTG
AAGTCTCGAAAGACATTTTATCAAATTTAAAACTGCTTCAACCAGTTGCAAAGTACAAGA
CTCCAAGTTTCAGAAAGAATCTATTTTATGATGTAGTTTATCAGAATTGTATAGAAGATG
AAATAGGACATTTAATGGAGTTTTTGAAAAGTAGTTTAAAAGAAGAAGACAATACAAAAC
AAAAGGACAAAAATGCTGCAATTGTATATTGTCGAACACGCGAGCAGACTGAGGATTTAG
CAAATATGTTAACCAAGAGAGGCTTTAAGTCTTTGGCATATCATGGAGGTTTGAAGTCAT
CCGAGCGTATATCAGTTCAGGAGGCGTGGTCGTCGGGCGAGTGTCCGTGCGTGTGTGCTA
CAGTGTCGTTCGGTATGGGAGTGGATAAAGCAACCGTAAGAGCAGTTGCACATTGGGGTG
TTTCACAAAACGTTGCTGCTTATTATCAGGAATCCGGTAGAGCTGGTCGCGACGGAAAGC
CTGCATTTTGTCGTATCTACTACTGTCGCAGTGAAAGAAATGCGGTAGATTTTCTACTGA
AAAACGAAATGGGTCGAGCTAAAACACCAGAACAAAAGCAAAGATGTAAAAATACCTACA
AAAGTTTTGAGATAATGGTTAAATATTGTGAAGACGTACGGTGTCGCCACCTGACGTTCG
CGGAGTACTTCGGCGAGGAGCGTCCGTCGTGCGCGGGCCGCTGCGACGTGTGCCGCGACA
GTCGCAGCGTGCGGCGCGCGCTCGACCAGCACTCCCGCCGCGCGCTCTCCGCCGCGCTCA
GCTCCCACGGCTTCGACCACTCCGCCGGACCGCAGCCCGAGCTCTACGGCGGAGGACGAT
ACGGACAGAAAATGGAGAGCGAGTCTTATTATGGTGTTGGCCATGACAGTGAAGATTCAG
ATGGAGAAATCACTCGTCGTCGGGTTGGCGATGAAACGAAATCTCTTATTTTAAAAGAAT
TTGCTGAACGTAAAAAACGTGTTGAAGAAAAGAAACCAATTGATACGCCAGAAGCAGCTA
AAAATTCAAAATGTCGTGCGGCTGAAAGTACTGGAACGAAGGTTAATGGTCTAACATTAT
CGAATCGTGAAGGTTATCTTACGATCCTTACTGATGTTCTGAGTACTAATCTGCTCAGTA
TGAAAGGCGTAGAGGAACCTAATAAACCACTTTCAAAAAACGACGTGGAACAATGTGCTG
TCGAAATGGAATATGAAGCGTTCAGTACTAATACCGTCGTCAGTATGTATAGACGGGCAA
TGTCGATAATGATTACAGCAGTTAAAGCCTGTCACGACAGTCTTTATCCCCAGTTAAAAG
ATTTCAACCCTAAGCCTCAAAAAGAAGAAAGTAAAAAATTTGACGGATTTGTGAAAGCTT
CAGAGCTAAGGAATGACATTGAGTCTAAAAGTGAAGCTCGGCCCCTTTCTAAAGCTGATA
AAGAAACTAAAAGAAAAGCTAATTCATTCAAAAAAGACCCCCTCACGCAAACAAAACTAA
AATCTTTCTTTAGTCAGACTAGTAAATCTTCTAACGACGATGAAGATGATAGTGACAACG
AAAACGGTCTTGTCATAGATGAAAGCAGTATAAATATTTATAACAATACGACGCTTAAAA
TAGCTGAAGAAAATACTGATCAGAACTCAAACCATCACAATGACACAACATTAAAGATTA
ATGAAATTGAAACTAGTGAACAAACAGAAGACGACGAATCAGAGCACAAAACTTTAGTCA
TTAATATAACATTGCAGGGAGTTTCTTCCAAAAACAAACCAACATCTGAATCACTCCAAC
ATAACGCTGACGAGCTTTTGAAGAATACTAAGTCACCAGAAAATAAAAAAGTAGCAAAGC
GAAAACTCAAAGATCTTTTTGGTGATTCTGATGATAGTGACTCTGATTTAAAAAAACCAA
AGAAATCTAAACAAGATGAGAAACATAAATCTAGTAAACATAAAAAATCACGTAGTGATA
GTAAAAAAACAAATAAAGCTGACACAAAGGATAATGTCCCAAAGAAAGAAAGCAAACATC
ACAATGATAGCAAAAAATCACATAAAAAAGAAGTAAATAATATTAAAGAAGAGATCGAAA
ATCACAATAATAAAGGAAATGAGGTTATAAAAACAGAAATAACAGAGGAAGAGGGTAAAG
TATCAGAGGTTGTAAAAACACCGGTAAAGGAGATTGTAAAGATAGAAGTTCCCTCTGATA
ATAACAATTATTCAGACAGTGACTCAGAAAAAGAATTAGTCATAGACATACCCAATGAAT
CTCCAGTTAATGATAATGATGACCATGATAAAACGGCTATCCTTCATTTCGAAGATCAAG
AAAATGAAATTAAAACTGAAGTTACAACAGACGAATTGAACATCCGAGAGGGCCGTATAG
GCACAGATGATGTTGAACTTTCTAAAGCATATAAACTAAGTAAGGAAGCAGATAAAGTTT
TAGAATCATTAAAACAATTTGCGGAATTACCTCAGAAACCGATTGTAGTCCAAACTACGA
AAATTGTGAACACAGATAAAGGATTAGATGATGAAACTAAACCAATATCACCAGAACAGC
ATCCTAAAACAGATAAACACGACAGAGACAAACATAAAAAACGACTTAGCGTTAAAACAG
AACATGTTAAACATGATAAATTACGTAAAGAAAATAAAATACTCAAAGATAAAGAAAAGG
AATTACAAAAAGAAAAATGGAAACACAAAAAGAAAACAAATGAAACATCTATTAACAAGG
CAGAAAAAGTAGATGTAGCTAGTTTAGTGGTTAAACTATTAATGCCATACTATAAGAAGA
AAAGGATAAGCAGTCGTGATCTTTTCAAAGTAACTGCAAGACATATCGTTCACCAACTGT
TAGCAATACAAGTTACCGAAGAAGCAGCTATTGCGATGATTTTAAAGAAAACGTTTACAA
AGGAAATGAAAATAGAAAAAGAAAGTGATCTAACAGCAAAGCTGAATTTGAAAAAGGATG
CGTGACTATTAATTTGTTGAAATATTTAAAATAATAATAATTATTTATTAAATTTTATCC
TTTGCATAATATCTATATCTATACCTAATATAAATGCTTATTTTTGCCAACAATAAAAAA
A
(3841 bp)

- SilkBase 1999-2023 -