SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23126c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_rho_GTPase-activating_protein_6_[Bombyx_mori]
Ontology
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005884 C actin filament
GO:0007015 P actin filament organization
GO:0007165 P signal transduction
GO:0007202 P activation of phospholipase C activity
GO:0007266 P Rho protein signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0010518 P positive regulation of phospholipase activity
GO:0015629 C actin cytoskeleton
GO:0016004 F phospholipase activator activity
GO:0017124 F SH3 domain binding
GO:0030041 P actin filament polymerization
GO:0043087 P regulation of GTPase activity
GO:0043274 F phospholipase binding
GO:0043547 P positive regulation of GTPase activity
GO:0048041 P focal adhesion assembly
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
Transcript
Level		FPKM:0.54 TPM:0.53
ORF EntryO_TrvaFAMAMG26677_internal:A_TrvaFAMAMG_TR23126c0_g2_i1
Sequence
(Nucleotide)
GAGCCGGACGTGGAGCGGCGGCGGTGGGGCGCGGGCCGGGGGTCGCGGGGGTCGCGGGGG
AACGCGGCCGGGATGTGCAGCGACGCCTTGATCACGCAGTCGTCGTCTGATGCACCTACC
ATCTCATTAAAGTCGCTGGCAGAGTCATTAGAGTCCTGCGCCGAGTCGAGTCTGTGCGCG
GTGCATGACGTCACGCCACTACTGCACTCCTCGCTGCTGCGGACCCTTGTAACGATGGTC
ATGGCGGAGGACATGGAGCCAGAGGAAGTATCAGAGGCGGTCTCTCTCGTCCGCCGCCGG
TGACTCTTCTCACTGCGTCTATCATGTGTGGTCGAAGGCGTCCCCCCAGTGGCCGCGGCG
CTGTGCAGACAGTCCTCCCTGGACCAGACGCGCCGCACCTCCCCCCCGCCCGCCTCACCC
TCGCGGCTCCCCTCGCGACCCAGCTCCCTGCCCTCCCGACCTGCTTCCGAGCAACGACGC
GCGCCCATATTGTTTTCAGTCCTCCTAAGCAGCAAGGAGTCGAGGTGTGCAGGGTCGGTG
TGCGAGAGATGGATGTAGGCCTCGTGAAGCAGCTCCGCGGGCAACGTCCACAACTCTGCC
TGTCTCTCCACTAACACTCGCACCACGTTGATGACGTCTGTCCTTTCTGATAGCTGTTCC
ACACTAGCTGGCTCATTAGGCTTATTCCTATGCAAGATATTAGGTGCAAATATCGTCGCC
AAGTTGCCAGGGTCCATCTTGTGACCAGGTTTGATCTCGTCTCCAGAATGCTCCGCGAGC
TGCGACAGGAATGACAGGAGCACGTTGAGGGTATCCCGATGGGCAGCAGGTAAAAGCTGA
ACGATCAGTCTGATGGCTTCCCATTGGTAATGGCGGTTGTGGATCTTTTGCGTGTTTAAG
AATGCAGAATACAAGTCCCTGCAGAGTAAGGGGTCTGGCAAATCCCTTAGGAATTCCTTG
AGTAGCGCAGCCACATCGTGAGGACTCACAACCGAGTCCAACGCGGCTTCTTGACACCTC
TCCCAATCTTCTCGTAACTGTCTAACTCTCTGTTTTGAGGAAGACACCCTGAAGAGACCA
GTAGCGTTGAGACCATGCCGTCGAAGATGGGCGATGCACGCTGTGATCAGCGCTGGAACC
TTCGGACCGCCAGCACCAGCCTCCTCCAACCCTGACCAGCCCCAGTCTCCGGAGTCACAC
GATTCACTATCGTCAGCCTTCTCACATGCCCCGAGGGATGCCAGCGAAGCCCTGGAGCCT
CCGTGGTGCTGCCGCCGGAGCGCCCTCTCGGTTTCAACACACTGGGACAACGGCAAACCA
AACATACTGCGGGTCGGCGCCTCTTTATCCTTGTCGGCGTCCTTGGTCCTCGTCTGGTCG
AAGAAACCGGTGGTGAGGGCCTTCTTCTTCAGCATGTAAGTCCGTCGTTTTGGCTTCGTC
GTTGTCAGCACTGTGTTGTCTTCTGGAATCTTGATATTGGTCCCCAAGTTGATCTGCTGG
AGCCTGGCCAAGGCCGCCTGCTGCAGCGCCCGGCGCTCCACCTCCGTGAGAGTCAGGAGC
GAGGTGTCCGTCAGTCTGACGCATCGCCCGCCTCCGTCTACCCAGCAACAGCTACCCTGA
GGCGACCACGTGCATGATGCTCGGCTGGAGCTTCGACTGCGCGTCCGCCACAGTCGCTTG
CTCACGTTCTGCACCACGCTGCTGGAAGACCGCGACTTCTGCATGCCACCTGCGGGCGGG
GCCACAGCTGGAGCACTACGACCCAGCAGGGTCGACAGAAACGAGTGTGACAGCGAGGGG
GATGCGGGGGACATAGGAGATGTAGGAGTCGAAGCCATAGACGCGAATTGCAAGTCTCTG
TACGTTAGGATCCATCCTTCCTCGGTCTGGCAACCTTTGTGGGGCCCGTCGTCGTCCACT
TCACCAGGCATACGAGGCTTAATGTTACGCAAGTTCTTGTCGTAGTTGATCCGTTTGAAG
CGGTCCACCTTCTCAGAGTCGACGCTCTTTTTGCGCGCCATCCTCAGGTAACGCTTGATG
GTGTCACTGACTGACTGCGACACGTCATCGTGATCGATGCTGGACCGACGCCGCCCTGGT
TTCCGCTCCGGTGGGGGACTGGTCGGGCTGGTCGGCACTGTCGCTGCTTCCACCTTCTCT
CGATATGCCTTCTCGAATTCATACAATACGTCTTCTGGAATCGGTGAAGTTTGCACCGCT
CTATCCACACATTTATCCTCAAACGACTCTTGAAACACTTCAATGAGAGGTGGTGGTGAC
ATTGGCGGAGACCGTCCATCTTCTCCATTTTTAATAAAAGTTCCGCCCAGTGATCGAGGT
CGCTGAGCAATCCTGGAGTTAGAGCTCAGACCGTAACCACTGGAAGAGTATCCTCCGCCA
CTTCCACCACCACCGCTACCACCACTCCTAGCGCCGCGATACGGCTTAGTCTTACGAAGA
TCATGATAAAGTCTTTTTAATAGATTTCTATCGGCTAACAAATCCTGAACTACCACGTCT
CTGTTCGGAGACCGAATGTAATGCCTACTCAAAGTATCAAGCAAATGGCGCTGGGCGGGA
TCTCCGTCCGCGTCCGAGGGAGTGCGCTCCGCATTTCGTTTTAAATATTCACATAAAGCG
CGTATCAGTTCCTCTGTTTCTGCGATTTTCGCCTGCGCTGGCGACTCGTCATCCTCAACT
TTGAGATATTTTCTCAACAAATCAACGAGACACGTTTCTTCCTCGATGACGGGCGGTGAA
CGAAAATCAAAGTGCACATCGTGCGGGCCTCTCGAGTTGCTGTTGAACCCGGAAGAAGAA
GCCGACGGTGGCGGAGCGGCGAAAAAGTTCCGCCGGAGCTTTGCGATGTCGAAGCGGCCG
CCGGAGACGTGCCCTACGTATAGGTCCGTGGGGCGCGGCGGCAACAACGGCTCATCAGAC
GGAGAGCGCGCCCGCACCGAGCCACCACGCGGCCGAGCCTTGCGCCGCGGTTTGGGTAGC
GCCGCGGGGTACGAACTCTTCCGTCGAAGCACAAAACGCGGTTCCCTGGAGCACACCTCC
TGGAAGTAGGCCTCGATCCGACCGATGTCCTCGGGGCGGTTCTGCGCGCCGTCGGGCACG
AGCCGGCGGCCG
(3132 bp)

- SilkBase 1999-2023 -