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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23117c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_CBL-B-B_[Papilio_xuthus]
Ontology
GO:0001784 F phosphotyrosine residue binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0004871 F obsolete signal transducer activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007166 P cell surface receptor signaling pathway
GO:0008270 F zinc ion binding
GO:0014068 P positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016600 C flotillin complex
GO:0016874 F ligase activity
GO:0017124 F SH3 domain binding
GO:0023051 P regulation of signaling
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0045453 P bone resorption
GO:0046872 F metal ion binding
GO:0046875 F ephrin receptor binding
GO:0048260 P positive regulation of receptor-mediated endocytosis
Transcript
Level		FPKM:3.89 TPM:3.81
ORF EntryO_TrvaFAMAMG26646_5prime_partial:A_TrvaFAMAMG_TR23117c0_g2_i1
Sequence
(Nucleotide)
GATATCTTTTAATAAAAATAAGACATCCAAAGGAACTTCGTTCTATTCGGGTGTCCCATG
AGGTGTCATCTCAAGTTTTATTTTTACAAAATTACTATAAAACTTGTTTTTTTTTTCATT
GCAGTACAGTGAAATTATTGAGGTATTGTAATATGATTATATTGAAAACTGTGACCAACT
GAAAAATACCTGTAATTTAAAATATGGTAATGATAATTTAATGTTACGAATTTAAGGGTC
AAATAATACGCACCGCTCATAAATGTCATATATTTTTTACCTAGGAACCAATGGCAAAGT
TGTTTGGTGACTGGCATTGCCAATTTATAGCATGAAACGCGAATAATATAGATCTACTAT
AGATAGTAAGATAGAACTTTTTTAAATTTTTTACACACAAAACATGTGACAAAAAAAATT
CAAACATAATTTTTGTGACGCAATAAAACTTTTGTAACAATGTTTTAGGTTAAAACTATT
ACAACACCATTATTTAGTGACAAAAATCCTTACACAAAAATCATGTGACAAATGATTTAG
TGACACAAAATTCAACACAATTGGCAATGCCAGTCCACAAAAAAAAAATGATAAAACCTA
GCATTTATTGGTCGCTTTTGATCCAAATTCGTGTAATATATCGCAGGCCATTTCCAGGTC
ATTTCTGGTGATGCCCAGGGCCCTAACAACGATTTCTTTGGGGTAACCTTCGCCTACCAA
TCTCGCGATATAGTCTAAATTAATGTTTTCATATGATACATTTTCACCGTACTTACGACC
GTGCTTGTCATGTGTGAGAGGATTGATTTTCTTTGGAGCTACAGCTAATTCATTTTCAGC
GCCAACATTCTCATACGGCGGGTCCTTGGCATCTTTCACATCTTCTGAGGGGAACTTCGG
CAAAGTCGTGGACTTAGTGGGCTGATCTATACTCCCGCTACTGTTCGTAGGCAACGACCT
CTGCCTAGGAGGAGCCCTGCCTTCCCTTTCATAATACCTAGAGTCCGGCCTTTCTGGCCT
ATCACTAAACTTTTCTAGCGACGTATGTGACCTTTCTAGTCGCTCTTGAGGCAAATTTAG
GGGAGGTCGGGCTAATTCGGGCTTGTCTGGTTTGTCTGTTTTTTCTGGTCGATCGGGGGG
GTTGGTTGGTTCGGGAGGGGGGGCTGGTAATGGTCGACTGTTAGATTGGGGCGTGCAAGC
TCTTCGGGGCTTTTCGAATGCGCGTGGGTCTGGTGGGATCTCGTGTCTAGTATCAATGAT
TCCAGTAATTGTTTCAGTGGACCCAGTGATGATGGAAGTCAAGCGATGCCGGGCGTCTGG
TTCAGGTTCTAAGGAAGATCTTCTTCTGGGTTCCAAAGCACTAGCAGTAGCTATATCCTG
AACGCTAGAAGCGGCTGCAATGGTCGGTTCGGCCGGCGACAGACTTTTCCTAGGGGGTAA
GGGAGGGGCTCTAAGTTCGCCGTACGCGTTCTCAGTGGGGGCGGGGGTGCGGCGCGAGGG
GCGCGGGGAGTGGCGAGGGGAAGCCGCGGGGGAACGGACTGAGGGACGTAACGCGTCTAT
AGTTGATGTCGCCGCGTTGAATTCGGCCCAGTCCTCTCCGTCATCAATGTCATCTGTCAG
TCCGTTGAATGTGGTATTTCTAGATGACCAGCCGTTTGAATTGGATGCGCTGCCATCTAT
ACTAGATCCATTACAACCAGACGATCCGGATGATCCTGAAGAATTTGATGAAACAGCTTT
CACTATTGGTTTTGGATTCTTAGCCTCAGAAGTAGTGTTGGGTGGTCTTGGAGGTACGAA
TGCATCGACAACGACTTGCTCGGTTCCTTTTATTTCCGCTCGACAGAACGGACAACCTTG
GCCTTCGGAGTCAATTTGCCACGCTGTAAGGCACGGAGTACACAGTAAATGTCCGCACGG
CTCTATTCTTATATCTTTGTCGTTTTCAGCGCAAATCTTACACAACTGGAAAGTGCTTCC
CATTTCACAATACAATTCGTATTGTTCCTGCGTAACTGTGATGTGATCTTCTGCCGGCGA
TATTATTGCACTACTCAAATCAGGATTCATATCTCGACCGTTTGGATATAAATAAAATCC
TTCTCTATAGCCGTCGAGTAACGCTTGCACCAAACTCTTGTTCTGCGGTATCGTTTGTAA
TATTTCACCGTCAGCCGTGACATAACCTATGGCCCATTGACCTAGTCTCGTGCATGATAA
TCTGAATACATAACTTCCGGCCTTGTGTATGTATTTCTGTAGCCTCGCTTTGACTTCATC
ATATGTTAAGAAGGCTACATATCCTGGATGCGTCACAGCCAACAGCTGCCAGTTTCTGAG
TAACGTACTCCATGGTTGAAATAATCTCGTAAAAACATCGAACTCGAAGTTTGATATGAA
GTCGTTACACGTCAGATCTATAGTCGTCTTGAGCGCCATCGTCTCAAGCCCTGATGTTAT
CGGGTGCACATTGTTCAGTTCTTCACGGAATATCTTCCAGGGTACCAAAGTACTGTTTCC
AAAGTTTGTTCTCCAGAATTCGGCAGCGTCACTCTTCGTAATCCTGAATTGATCACCGGC
AAAGGTTCCATTAGGGAACATAGCCTTCAATTCGCTCAACATATGACTAAAAACTAAACT
AAGCTTCGTCAGATTCCTTCGAAAATGTGAATTTTCGTCGAACATCTTTTCTTTACCCTC
TTTGAACAACTTTATAGCCTGTTTACACTTTCTAATCAAATTAATTATAAATATATTAAA
ATGTTCATTGTTATTCAACGCTTGCATATTGTCCTCGTATTTCGAATATATTATGCGTAG
CCTTTGATATGTATCAGGTAGAATGTCTAAAATGAATGGCGGGCTATTTTTCAAATTCAT
TTTGTGATGTTGACACAGTTTCACGACTTTGTCCATTAGTTTCCAAGTTTTGTCCAGTGT
CCGTTTGTCTGTCGCAAGTTTCGTGGGACACACCGCATCGGAAAAAGCACCGTGCA
(2996 bp)

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