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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23101c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_endonuclease_III-like_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:2.31 TPM:2.27
ORF EntryO_TrvaFAMAMG26616_complete:A_TrvaFAMAMG_TR23101c0_g1_i1
Sequence
(Nucleotide)
GGGAGGTCTGCCTACGCTGCGTCTACCAGTTCGTGGTCGCCACTCTAGAACTTTTCGACT
TCTTTTTAAACCAAGAATCCTGATTATAATTTCCAGGTTTACCGATATCAATGTTTGATT
TCTCTAATGTTATCGAGTCAAACGAAGGACCAGGTTAACTTTGCTGCCATGCAGAGACTC
CGAGCTCGAGGACTTACTGTCGATAACATTCTGAGCATGAGTGATGATGAACTGGGGAAG
TTGATATACCCTGTTGGGTTTTGGAAGACAAAAGTAAAATACATCAAGAAGACAACAGAA
ACTTTAAAAGAACAATACAATGGAGACATTCCAGATTCAGTTGAAAAGTTGTGTAAATTA
AATGGTGTTGGACCAAAAATGGCACATATTTGTATGAAGGTAGCTTGGAACAAGATTACA
GGCATAGGTGTTGATACACATGTTCATAGGATCAGTAACAGAATTGGTTGGGTAAAAAAA
CCCACAAAAACTCCAGAGGAAACCCGTATAGCCCTTCAGAGTTGGTTGCCTTTTGAGCAG
TGGAGTGAAGTTAACCATCTTCTTGTTGGCTTCGGACAAACTATTTGTCAACCGATAAAC
CCTAACTGTGATGAGTGTTTGAACAACGACATTTGCCCTTCAAGTACTGTAGGAAAACCA
AAAAAGAAATCTCCAAACAAAAAATTGCAGCATGAAAATGAAGTTAAAGTAAAATCTGAA
AATGATATGGAGGACTTTCAAGTAAAGAGTGAAAAAGCTGTCAAAAGTAAAAGTCCAAAA
GTGAACGAAATTAAAATTGAGAAATCTGAAGCTTTAGACGTAGAAGTCAAAATTGCACCT
GCTACAACCAAACGTAAAGTCACTCCAAACAAAAATTACAGTTTGAAACCTGAATCACAT
ACTGATTCCTCAACCTCAAATGAAGATGCTCCCAAAACTAAAAGAAAGATAACACCAAGA
AAAAACAAAGAAATCAAAAAAGAAGAAAATCTAGATGTCACTGAGAGTGAATTTCAAGAA
CCTAAAAAATCACCTTTGAAAAGAAAATCACCAAGAGTAAAGGCAAGTAAAACTGTAACT
TCTGTGGAAGACAATAAGAAAAAGAGAACTAGGTCTGCTGAAAAATAGTTTTTTAAATAC
ATTCTTTTAATACTGTGTTATTAGTTTAAGGATCAAAGATCATGTCAACATTCTACCTCA
TTAAGAAATACAGCTTTTGTTACTTAAATCAACATTTTATTTATTTACTGTTTTCTTCTC
CCACCTTTCCTTTTTCCTTTATCTTTCTTTTGATCTGTTTTACCCATATGCCGTTTCTTT
TGTTGTGATTTCTTCTTGTTCTGTACCCTCTCCATTTTACTTTTCATTTGGAACACTTTG
CTCTTTTGTATTTTCTTTGTTGCTTGTTGTTTGAGCATTCTTTTTATTTCTTTTTTAGTT
TTAAGTTCTCCTTTCTCTGTTTCTTCTTCTGAAGCTTCACTTTCAGCTTCTGATGTCATA
CCAGGGATATGATTAGTGTTATCTTGTTGTTTTTTCTTGGCAACTTTTTTCTCCGTTGGT
GCTTTCAACTTGTTTTCACCGATGACTAAATCTCGCTTTTGTAGTGTGTCTGAGGAGAGT
TCAACTATTTTAACTTGAACATCTTCTTCTTCATCTTCGTATTCTTCTTTTAGTATTTGT
TCGATGTCTGGTAAAGGACGACTGGACACAACTAACTTCTTGTAAGATTCTTTATTCTCC
TGCTTTATACGTCGTTTTTCTTCTTTCAATAGTTTCTGTAATTCTTCTTGTGCTTTCTTT
TTTCTTTCCAATTTCCTTTTTCGGAAACCGCATAAAAAGTCCTTTCTTTTAGCTTCGTCA
AACACAAGACTAACTTTTTTCTTTCGATCTTGATTTTTACTTTTCCTTTTGCCCATTTTC
ACTACGGAATCGGTAGCGATATAGCTAGTCGATCAACCTTTTTACTATTAAAAACACAAT
CCTTACTCGTTCTAAATAATTTCAGTTTTATCTTCACTATTAAAGGTAAAATAACAAATC
TCACGCGTGAATAACCTAAAATTAAGACGAGTACACACGAGTAATATAGTTTCTGATCTG
TGGTACACAGGAGTTCACAG
(2120 bp)

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