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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23058c3_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-12_[Papilio_xuthus]
Ontology
GO:0005515 F protein binding
GO:0005769 C early endosome
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0010629 P negative regulation of gene expression
GO:0010955 P negative regulation of protein processing
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016050 P vesicle organization
GO:0019898 C extrinsic component of membrane
GO:0019899 F enzyme binding
GO:0030100 P regulation of endocytosis
GO:0035091 F phosphatidylinositol binding
GO:0042177 P negative regulation of protein catabolic process
GO:0051224 P negative regulation of protein transport
GO:0070062 C extracellular exosome
GO:2000642 P negative regulation of early endosome to late endosome transport
Transcript
Level		FPKM:29.15 TPM:28.56
ORF EntryO_TrvaFAMAMG26488_complete:A_TrvaFAMAMG_TR23058c3_g1_i1
Sequence
(Nucleotide)
CACAGCGCCATCTAGCTATCTTTTAAAACACGTTCCTTATCGCAAAACAAAATCATAAGA
TATCTTTTAATCGAAAGGAACTTCGTTCTGTTCGGGTGTCACACCTCTCAAGATTTTTTT
TAGAGAGAGTAGGTAAAAAAAATTTTAACATTCAAATGGTAGCCCGAGAGCTAGTGCCAA
TTTTTGTGTAAGTATTTGAGGCAAGCTGAAAACTCGGTCTATAGTTCTTCTAATATACCA
GAACTCGGAGCAGACCTGGCTGCTGAGTACAGGGCTAAACGGACCCTTACATTTTACTAG
TATACGACAAAAATCGATTTTTATCGCTTAATATTAAATTTGTTTTCAATTGAAGACCCT
TTAAGACGTTTTGTAAAACAATTGATGTTTAGAGCAGATTTTTTTTAGGCACCATTTTGT
TCTGTAAAATGTATCTAGTACCATTAGATCGATGATTCAAACAATAAGCATCAAGCTATA
AACTAAAATTCCGATAATAATAATAATTATTGCTTAAAACAATTCCGTTTTAATAATTTA
ATAATTTCTATTTAAAAAAGTGTTTTACCCAAACCTTTTCGGACGCCATTTTGTGGGTAA
CTCCGTAACAAGATGGCGGCTCGTAAACAAGATGTCCGGTTGTGTTCCATTTAAAAATAT
ACTCTGAGGAATGCTGTTCTTTTTATATATTTTGTCTTGTATGTATTTATAGGAATGTTG
ATTGCAAATTTTGTGTTGAAAACCATGTTTATTTAATGAAAATTTGCAATAACATCCAAT
TAAGCTTTAAAGCAGCCCGTGAAATGACATCTCTTTAAGCATCACAAAGTTAGTTATTTG
AGTTTATACCTGAGTTACAGTATCAGAAATAAGTTCCTCAAAAATACATGTTTTAAATCA
ATATCAATTTAGAAACTACAGCACGATACCGAAATGCACATGGGCATTAAGAAAGAGAGC
GGTTAATAGTCTCCTTCCAAATGCGTGTAAAATATCAACTCAACTGGGAACTAACCAATA
TTGGCATCTAGTTGTGCCATCAATATACATGGCCTCATAATGTAACTCAAGTGTTCATAT
CACGGTCTGCTTCAAGCCACCAGCTCAGTGCTAGTATTATGTGTTCCGTATCTTGCCGGG
CACGTAGCTGCGGTCGATGGTGGGCTCCTGCAGGAACATGTGGAGACAGCGCTCGTTCTG
AGCGAGGGGATGGCCGGCTATCTTGTTTATGAATACTTCTAGACCTTTCCTGCGGTCTTC
TATAAATTCTTCTTCAAATATACCATCGTCTCCTCTAAACGGCAACTGCCTCTTCAGTGC
TTTGCCGGGCAAAGGTGGAACCACTATCTTGCTGTCTCTTTCTAATTCATTTCTGAGCCA
TTCGAAGTCGCTATATCGCCTTCTTACGCTTGAATCTTTCACTTTGAATACTGGAAGATT
TGTCCTCATATGAACTTCGTAATCCGTGTAGCGTTTTTTTTCCGACACCCATAGTGGTCA
CTGGATTTACGACGTCGATTTCTAAGAAGTTCGCCGGCGCCGCGTAAGCATCATCTAGCG
TTTGTTTCTTTACATTTAGGCGCCTTGTAGCCTCGGCTGTTGTTTCTTCAGCCATCATTT
CGAATTATTTATAGTTAAAACACAATTTCACTTTAGAACGGCCCACTAATACAAGGAAAC
GAAAAAATGACAAACAGGATGAATGAAAA
(1709 bp)

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