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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23043c2_g1_i10
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_R_isoform_X3_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0045727 P positive regulation of translation
GO:0048027 F mRNA 5'-UTR binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0071204 C histone pre-mRNA 3'end processing complex
GO:0090367 P negative regulation of mRNA modification
GO:1990635 C proximal dendrite
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_TrvaFAMAMG26401_complete:A_TrvaFAMAMG_TR23043c2_g1_i10
Sequence
(Nucleotide)
GCGTTGCTGCTGCACGCCTCGCACCGGTGGTTGCAACACCCTCCCCCCTTCATTCTCGGC
TTCTCACTCGCCGCCGTCTTGCCGCTAGCCTGTCTCACCTCGCGGCCGGCAGCCTTGCGC
GACGCGCCGCGCTCTTTCACATTCAAAATTATTCGCAACCATTGCAAAAATCTCTGTGCA
ATAAAATTACAATATCGTTTATTGCGGTTATCATTAGATTTACTACAGAGGCATTAGAAT
TATATTCGTAAAACAAATTTTATTTTGCAAATTTAAGTGGCCATAAAAGTTTGAATGCAC
TCCTCGTTGCATATCCCGCGAATTCGCCTCGTTATGAGAACCCCGTAGGTACTGGCGGTC
ACGTTGACGTCGCGCGGACCGCGGTGCCGCCATATCTGTCTCGGCCACAACTAGCAAAAT
TAATAGAATGGCGGAAGGCAATGGAGAAATACCCTATGATGAGGTAGCTGGAAAAGATTC
TGATGTTGGCCGGACAGCAGATTACCACAAACTCCTTGAATATGGCTTAGATCCTAAGGT
AGCCGCCAAACTCGACGACATTTATAAGACTGGAAAGCTAGCGCACGCAGAGTTGGACGA
GCGTGCGTTAGATGCCTTAAAAGAATTTCCATCCGACGGTGCTTTAAGTGTTCTTGGACA
ATTTTTAGATTCTAATCTCGAACATGTATCCAATAAAAGTGCTTTTTTATGTGGAGTTAT
GAAAACCTATAGACAGAAAAGTCGAGCGGGCGTGCCTGGTGCTCCCGCGTTGACGCCCAC
TGTGCCGGTCAAGGGTCCAGATGAGGAAAAAATAAAGCAAATTTTAGCCCGGACTGGGTA
TACATTAGATGTTACTACAGGTCAACGTAAGTACGGGGGTCCGCCGCCCGGGTGGGAGGG
GGGCACCCCGGGCGCCGGCTGCGAGGTGTTCTGCGGCAAGATCCCCAAGGACATGTACGA
GGACGAGCTCATCCCGCTGTTCGAGCGCTGCGGGACCATCTGGGACCTGCGCCTCATGAT
GGACCCCATGACGGGCGCCAACCGCGGGTACGCCTTCGTCACCTTCACCACGCGCGACGC
CACGCAGCGCGCCGTGCACGAGGTTAGTCATCCAACACATGTACCTACACGCACACACAC
ACACCCACAGACACATGTACACGTACACACAAGATACCTACAGTTGCACTGGTACAAAGG
CAAATAAGAACACAGACACTGACAGTTACTTTCAATAATTTTCTTATATGGATACTGAAA
CAAGGACACGCAGAGATTTTGAAATACACAATAAAATTTTACAATTCTCAATACAATATG
TAAAACAAAAAAACGTAGACACATTTTTTTAGTCTTAAGGAGGCTCTCTGAAAGTGACAA
CATACAACATTACAATTCTAATTGTCAACTCGATTATACGAGATGTTTCTTACGTCCTAA
TGTATTATATAAAGTGTAGCTTTTAAATTTAGCCTTGTGTTTTGTCACATTCTGGAGCAA
TCAGAGTGCATGAGCACTAAACTCCGGTGTACCGAGGCACAGGACGAGTGTTGTGGCGGT
CGCGTTCGCGCGCCATGTCCTCCCGTCTTATCTATATTTGTTATCGTGTAAAACAAAGGA
GTCACTAGCACGATTGGTAACAACTAAATTGTGTCGAAAACTCGAACGATCACCGATAAA
TAGGGTTGCCAACTGTACTTATCTTTGTGGCCTAAAAAATGAGACTAAGATTTTCTTTTG
CAATCTTTAAATTATAATAACTTCAGTTTTTTTTGTGTTATAATATCGAAAATCTTGCAA
TGAATGTAATTTATGGGTGGGTGGTTAAATTTAATACATATAGCTACTATTCTAGAGATG
TAAAAATAATCGTATATAACGTTATTTAATCTTTTTTTTTCAATCGTAAGAATATATAAC
TGTACTACAATTTGATTTCAAAGTTGGCAACCCTACCGATAAGTGTCACATGATGTTCTC
ACTTTTATAATTGGTGTGTGAATCTGATGCAAAATTTTCTAATTGAACGTCTACTTTGCA
GGTTTCTCGTCGCAATGTTAATGACATTCCTTTATTAACAGTATTAATGCACCGCGTTTC
GCGTGTGGCGGTCTTTTTATTCCATTTTCAAATTAAGTTTTATAACCGCCACGCGCGAAC
GTCGCTTGTCAAAGTACTCGTCCCATAAACCAGCACTTTGGCAAGCATTGCCTGTTCATA
TATTCTCAATCACTTGGGATGTTTATATTTAAGCTTGTCTCATTATATAGCATGTTATTA
ATAATCCTCCCAAAGGTCGTCATTCACATACACAACGCTTGAAACTTGTCCACTTCAAAT
GATTCAAATAGTGTTGTATGTGAATGGCATCCTTGCTGCAATAATCACATATTGTCTAAA
TGTGCAACCGTAACACCTATACTGAGTAGCCTCGCTTCTCCTAAGACATGATCCCATAAT
GTAATGTTGCACCTCGTTCAATTTAAGTTGCTTTCATTTTATTTACTGTATGTCACCATC
ACTCTAGTACTCGCTTCTTTTTATTTTCACTTCATCAAACGGTCCACTTACAGGGTTAAC
TTTGAATTGGCTTCGTAAAGTTCTCAAAACGAGAATAAATATCAGGCTCTCCTCTTTGCT
CAGTCCACACTTTCGGCTTGTCATCCAAAGTTCAGTTAACACATCACGATTGGCTCTAAC
CGTCATCTCCCGGAGCGGCTGTTGTCGCGGCGCTAGTGACGCTACGTACCCGGCGTACAG
TGCGCGACAGTACGACACGGCTCGACCGGATCCGAATCACATTTTTCAAAATTGTTCCCT
TGTTATTTTTCCCACAGCTCGATAATCACGAAATAAAACCAGGGAAGACTCTGAGAATTA
AGATTAGCGTACCGAATCTGCGACTTTTCGTCGGCAACATTCCCAAGTCTAAAGGCAAAG
AGGAGATACTGGAAGAGTTTGGTAAATTAACAGCTGGACTGGTTGAAGTCATTATATATA
GTTCGCCCGATGACAAGAAGAAAAATAGAGGATTTTGTTTTTTGGAATACGAGTCTCATA
AAGCTGCGTCGCTGGCCAAACGCAGACTCGGCACCGGAAGAATAAAGGTGAGTCGATCTC
TGATAATATACATGTCTTATGCTATTAGATTGTGTGAAACAAAAGTTGAAATGATTTAAT
TTGTTACGTTGAAGCAGGTTTGGGGCTGTGATATTATAGTCGACTGGGCTGACCCTCAAG
AAGAACCCGACGAGCAAACTATGAGCAAAGTGAAGGTGCTGTACGTGCGGAACCTAACTC
AAGACATCACGGAGGAGGCGCTGAAGGAGGAGTTCGAGCACTTCGGGAACGTGGAACGAG
TCAAGAAGATCAAGGACTACGCGTTTGTGCACTTCGACGACAGGGATGCTGCGGTTAAGG
CGATGCAAGAACTGGACGGCAAGGACCTGGGCGGGTCGCGCCTCGAGGTGTCGCTCGCCA
AGCCTCCCTCCGACAAGAAGAAGAAGGAGGAGATCCTGCGAGCTCGCGAACGGCGCATGA
TGCAGATGATACACGGCCGCTCCGGGTTCGACTGGTGCGGATGTTCCCCGCCGCACGCGG
GCCGCGGTCGCACGCCGCAGCAGGCGCCGCGCCCGCAACACTCGAGACCCGATTACGGGT
GGGTCATGTGGGACGGGCGGTCGGTGGGCGCGTCGCGGGGCCGCGGCTGGGGCCCGTGGT
GGTGCTCGCCGCGCCGCTCGTGGCCGGCGCACGCCCAGCGCCACGCCTGGCAACCCGCGC
GCCAACCCAAGTTTACCAGGTAAACGCAAGCACGACGGGGGTCACGAGAACCAAGGGGGA
GAGTCGAAGCGGCGGCTGGGCGCGGCGGCGGCGTGCGAGTGGGGCCCGCCGGCGGCCGCC
AGCTAGTGTCGCAGTGCGCCGCCGCCGCCCCG
(3932 bp)

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