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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2303c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005583 C fibrillar collagen trimer
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008201 F heparin binding
GO:0016337 P cell-cell adhesion
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0031012 C extracellular matrix
GO:0032963 P collagen metabolic process
GO:0043206 P supramolecular fiber organization
GO:0043506 P regulation of JUN kinase activity
GO:0048251 P elastic fiber assembly
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.41 TPM:1.38
ORF EntryO_TrvaFAMAMG1484_internal:A_TrvaFAMAMG_TR2303c1_g1_i1
Sequence
(Nucleotide)
GAGCAAACGCGGAATGTAGTGATGGTATTTGTAAATGTAGAGATAACTATTTTGGTAATC
CCTACTTAAGTTGTCGACCTGAATGTACTCACAACTCCGATTGCCCAAAAACGTTAACTT
GTGTCAATAACAAATGCATAAATCCTTGCATCAATCTATGTGGCCAAAATGCGTTATGTG
AAGTTTACAATCACATTCCAATGTGTAGCTGTCCTACCAATACAACTGGAAACGCATTTT
TCTCGTGCACTCCGAATAAAGTTATTACTACTACGACTCCCTGTCAACCAACGCCTTGCG
GTCCAAATAGTATTTGTCGTGCAATTTCAAATCAGGCAATGTGCTCATGTATCACCGGTT
ATGTCGGTAGTCCTCCTTCATGTAGACCAGAATGTGTAGTAGATTCTGACTGTACAATTC
TTTTGTCTTGTTCAAACCAAAAATGTGTGGATCCATGCCAAGGTGCATGCGGCAGAAACG
CGGAATGCAGAGTTCACAATCATAAACCTATTTGTTACTGTAAGAGCGGACTTACTGGTG
ATCCATTCTCTTACTGCACAGTTATTCAACAAGAGCCACCAAAAACTGCACCATGTACAC
CATCGCCATGCGGACCAAACTCTCTTTGTAAAGCAATTGGTGACGAGCCACAATGTTCAT
GTCAACCTGACTTTGTTGGCGCTCCTCCTTATTGTCGTCCAGAGTGTGTAGCTAACAGCG
AGTGTAATTTCAACAAAGCTTGTATCAACAACAAGTGTGCGGATCCTTGTATTGGAGCTT
GCGGTCCTAATGCTGAATGTCGAGTTATAAGTCATTCACCGCAATGCACTTGCCTATCGG
GTTATGAAGGAGATGCGTTCAGTTTTTGTTACCCTGTCATAGGACGAGATCCTCTTCCAC
CTATTGATACAGTGCAAGCATGTATTCCTAATCCATGTGGTCCAAATGCAATATGCCAAG
AACGTTATAATATTGGCAGCTGTACTTGTGCAAATGGTTTCTTTGGCGATCCATATGAAG
GTTGCAGACCTGAATGTATTGTTAACTCAGATTGTGCTGAAAACAGGGCTTGTATCAACA
AAAAATGTCAAGACCCTTGCCTAGGACTCTGTGGAAGAGACGCACAATGCCAAACAACGA
ACCACATTCCATCTTGTGTATGTCCTTTCGGATATGTTGGAAATGCTTACGAGAGCTGTG
TAGTCAGAGAAGAAAAACCGACGAATCCTTGCCTTCCGTCACCTTGTGGAGCTTACAGCA
CATGTAAAACTATAAACAATCAGGCAATATGTTCATGTTTACCAAATTATATTGGAAATC
CACCAAGCTGTCGACCAGAATGTATGATGAGTTCCGAATGTCCCTTAAACAAAGCTTGTG
TTCGTCAAAAATGTGTCGATCCATGTATAGGAACATGTGGTGAAAATTCCAATTGTCGTG
TACACCAGCATAGTCCTTATTGCACTTGTTTACCAGGATATGAAGGGGATCCATTTATAA
GATGTACGAAAGAATTATTATCGACCCCGCCTCTTGCTTCTCCGTGTGATCCCAGTCCCT
GCGGTCTATTTGCAACCTGTCATGACTCTAACGGTTCTCCGATATGCAGCTGTAAGCCAG
GATATATTGGAGCCCCACCTCGATGTGCACCAGAGTGTACCATTAATGAAGACTGTCCTA
ACAACAGAGCGTGTGTTCGTGAAAAATGTGTTGACCCATGTCTAGGGTCATGTGGCACCC
ATACCGACTGTCGTGCTATGAACCACGTGGCTATTTGTACATGCAGCATAGGATACGAGG
GCGATCCATTTATAGGTTGTTCATATCGAGAAATTCGACCGCCTACATACGATGCTTGTT
CAAACTCACCTTGCGGTGTTAACGCTGCATGTGATAACGGAACTTGTACATGTCGACCCG
AGTATCATGGCAATCCTTATATTGAATGTAGACCGGAGTGCACGAGTGATAATGAATGCG
AAAAGCATCTGGCGTGTGTCAATTACAAATGTGTTAATCCATGTAAAAACGCCTGTGGTG
TAAATGCAATTTGTAACGTCTATAATCATATTGCAATTTGTGAATGTCCTATGCCACTGC
AAGGTGATGCTTTTATATCTTGTCATCACGCAATTGAACCATCAGTGTCAGACCCATGTA
CACCAAATCCCTGTGGACCAAATAGTATATGTAGAGCAGAAGGAATTGTAGCACACTGCT
CCTGTCGACCCCCAATGTATGATGATCCTCCAAGTTGTAGACCTGAATGTCGTGCTGATT
CAGAATGTCCACCTGATCGTGCTTGCAGAAACAATAAATGTCGTGACCCTTGTCCTGGTT
CATGTGGATCCTCGGCAATTTGTCACGTTAGATTCCACTCGCCTGTATGTGCATGCCCCG
CTAATTACGTCGGAGATCCATTTATACGTTGCCTGCCAGCCATCGAAAATGAGCCGTCGA
CCCACTCACCAGACCCGTGTACAAACTGCGGACCAAACTCAGACTGCATAAACGGCTTAT
GCAACTGTAAATTAGGCTATATTGGAGCTCCACCTTCATGTCATCACGAGTGTCTGAGTT
CCAGCGATTGCGACTGGCACCTTACGTGCTTGAATTTACGTTGCGTAGACCCTTGTCGAG
GGGCCTGTGGACAAGGCGCCGTTTGTGAAGCGTTCGCTCATGAGCCTCGTTGTAGTTGTC
CTCCCTCTACCTCCGGAAATCCATTCTTCGAATGTCGGACCATCGTTACAACCCAGAAAC
TTCCAAATGATCCTTG
(2776 bp)

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