SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23032c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DNA_polymerase_theta-like_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0071897 P DNA biosynthetic process
GO:0097681 P double-strand break repair via alternative nonhomologous end joining
Transcript
Level		FPKM:0.98 TPM:0.96
ORF EntryO_TrvaFAMAMG26327_complete:A_TrvaFAMAMG_TR23032c0_g2_i2
Sequence
(Nucleotide)
TAATCAACAGATTACTGAGGATGACGTATTTAAACAACCAGAAGAAATATTATATCTTAA
AAATCAATTGAACTGTACCAACAACGTAAATAATACCGAGTCTTGTACAACAGAAAAATC
GCTCAATAATAGTGCTTGTAAACTTGAATGTGTGGACAGTGAAAGAGAATTGAATGAATC
TGAAACTAAAATTATGGCAAATGATGTGGTAAATCAAAATTGTCTATCAAATGGTTGTAA
TGATGAAATTGTTTGGGATTCACTTAGTTTCACTGAAACAGCATTGGGGAACCTTACAAA
ATTTCAGACTTCAAATAAAGCAATATCCTCTCCCAACTCTGTTTTTAGTGATGCCGATGA
TTCTGCTGCCGGTGATAAAGTTAAAAACACTTTATTATTCAAAAATGTTTCAGTGAAAGA
CGTAAGTTTGTTTTCGTCTGATGGCGATAATTCAAGTTTATTTGAAGAAAGTCTTCCTTT
GGATTTAATCCCTAGTAAATTACTCCAAGAAACACCAGATAAAAAAAAACAGTTTTTTAA
TTTCTGTGATATTAATTCGACTACTATTATAAATGAATTCAAATCATCTTTAACTGAATC
AGATGATGGAGAAGAAATGAAATTAGTATATGAAGAAGATGATACTGATAAAGTTAACGC
ATTGAAACAAGAAGCAATCAACTTAATACCTACACAGGGTAAAAGTCCATGTAAAAGATA
CACTGACAATAATGTAATACAACCTTCGATTAAAAAACCCAAAATTGATAGAAACCTAAA
TATCAAATCACACTGTACAGATTGGCTAGAAAAATTAAGTAATTGTAGATTACAAAAGTT
TACGATTAAAATTGCAACTACAACATTGAATTGTACGATATTAAAACTCAATGATATTTT
CAATCACTTTGATATTCTCGAAAATTTGTGGGAACCTTCGATATATTTTAATTTAGAAAA
ATATACGAATTCCAGTGAAGTTATAGGGCGGAAAATATTTAATGAACTGAATATTACAAA
GAAAGGAAATATGTGTACTATAAAGGGAATAGCTTTTTGTTTTAATAAGACGGAATGTTT
TTATTTGGACCTCATATCACTAGACAATAAGTTAGAGGCAATTAAAGATAAAATGAAATT
ATGGTTTCAAAATACTAATTTGATACTGAAAATGTTGGATCTCAAAAAAAATTATTTGCA
TTTAAGAAAATGGCTTGGTGTGGATATGAATGCTTCGTGTGTGGACGTTTCTTTAGCGGA
ATGGTTGAAACACAGCGATGAAAGAATGCCCGATGTGTCTTATTTGACACAAAAGTATTA
CGGAATAGACCTTTCAAAAATGACTATAAAGATTGATAATCGTCAAACAAAACTTAAGAA
TATGACTGTAGCAGAAGAATCGTGCTTGAAAGCGTGGGCAATAGGGGTGATAGCAGAAAA
ACAACAAAACATGCTTTACGAAAGTTATCAAAATGCCCTCAACGTAGAAATCAAAGTTTC
GAAGATTTTATCAAACTGTGAACTTTATGGGATTACCGTTGACAAAGAACTAGTATCGAA
ATTGTTGATTGATGTGCGAAATTCACAGGAAATATTACAGAAAAAAGCTTTCAAAATTTG
TGGACATCATTTTAATTTTAATTCATCGAAAGATGTTGCTAAGGTTTTAGGGATTTACAA
GGGTCGGAAAGTAAGCACGAAAAAAAAGTGTTTTGTCGGCTCATAACAGTCCAATATCGA
GCATAGTGATATATTGGAGAAAGTTGAATGCCATATTGACTAAAACTTTGTACCCTCTAA
CCGAGAAGGCGTGTAATTATAGCGAGGGAGACCGGATAAACTCGAGCTACTCAATGTTCA
CGTGCACAGGTAGAATCACAATGCACGAACCGAATTTACAGAACGTTCCTCGTACATTTT
TCATTCCAATTCAGTGCCTTACTTTAGAGAGCGTCAAAAGCGATGACGTCATAGAATTCA
ACTGCAGGAACGTATTCAGAGCAGCTCCGGGCTTTGTTATGGTTTCCGCGGATTACTGTC
AGTTGGAGATGAGGCTTCTGACACATTTCAGCGAAGACGATGTTCTCACGAGAATTATGA
GATCCGATGTTGACGTGTTCAAATCTATTGCAGCTTCTTGGGGCTGCGTACCGGAAGATG
AGGTTGACGACGATCTCCGCCAAAAGGCTAAACAACTTTGCTACGGCATAATATACGGAA
TGGGCAATAAGACGCTATCCCAACATTTGGACGTTTCAGAAATGGAAGCGGCCTTATTTA
TGGATTCTTTCGAGAAAACCTATCCAAACATAAGAGTTTTCACGAAATCAGTTGTAGAGG
AATGTAGAAAAAAGGGATATGTTGAAACTTTTAGTAAACGAAGGAGATACCTACCGGATA
TTACGAGTAATATAATATCCCGACGAAATGCAGCGGAACGCCAAGCAGTGAACACAACTA
TTCAAGGTTCCGCAGCGGACATAGCGAAGTCCGCAATGTGCTCCATCGAAGAAAGAATAA
ATTATTTGAATCCCAAACCTCGACTGATATTACAAATGCACGACGAACTTATTTACGAAG
TTCACGAAACGAACAAATTACGTTTTATATCTATCATGAAAAGTGTTATGGAGGGTACAG
TAAAGCTGAAAGTGCCTCTACCCGTCAAAGTCAAGTGCGGTTACACGTGGGGCAGCCTTG
ACGAGGTCTCTCTTTGATAACAATCTTGTTCCGCAGTACTAAAATAAAACCTCCGTATTC
TGTGATATTGTCCCATTTTTGTGATATTTTTTGTCGAACAATAAATTATGTATGGATTTA
AGTTCGTTGTATTTATTTCGGTTTTTTGAA
(2850 bp)

- SilkBase 1999-2023 -