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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23030c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_nonstop_[Papilio_machaon]
Ontology
GO:0000124 C SAGA complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0008347 P glial cell migration
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021782 P glial cell development
GO:0036459 F thiol-dependent deubiquitinase
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071819 C DUBm complex
Transcript
Level		FPKM:3.69 TPM:3.62
ORF EntryO_TrvaFAMAMG26315_complete:A_TrvaFAMAMG_TR23030c0_g1_i1
Sequence
(Nucleotide)
CTTTAACTCAAAGGAGACCAATCAAACTATTTCAAAAATGTGTTTTACATTAATACTTGA
CAAGTTATAAAGTACAGTTATTTAAAGTACATATTAATTTAACAATCAATAAGTTTACGC
AGAAAACACTTTCCAAAAGCAGTACTTAACACTACAAAAATCTCCGTTAAATATAAAAGG
AAGCATAACTATTTCAGACAAAGATTCATAAAAGATTTGTTCGTATGATGGCAGTATTCT
GCTGTAGTAAAAACAACTTGTAATTTTCAGTCACTACAAAAATTTTAAGATTAAAGCTTA
CAAACTAACAAATTCGTAAATAATTTTGCAGGGCAAAATTAAATAAAATGATCAAGACTT
TTCATCTATGTACTAATATCACTAGAAAATATGACTTTTTTTTCTTACACAACATCCAAA
AATTATAAGGTTTCGTTCAATAAAATAACCCAATTATTGAGGGATACATTACGTAACCAT
CAGACAGAGACATGATTCAGAGTAAGAGCGGGATATTCGTCAGTTAAAGCTTTAAGAAAC
GTCGCATTCATACTCCAGGACAGTCTTGTGATAAAATAGAAGATATCCTTCACTATCTAA
AACTTCGCGGAGTGATGCGCGAGTGATCATGTGATCATCACACTTGAACCAGCTGCCCTT
CATCTGGCGGACATAGGCCGTGTAGTGGCCTGCGTCGAGTGAGCCGAGGTGGTTCACGAC
AGCGAACAGAGAGTAGCGGTTATCTTCAAACATTCCTTCAGGAGTATTGTTGTTCTCAGC
CGCGCCTACATCAACAGCGCGACGGTGAGATGACATGAATGGAGTCATATCCAACTCAGC
AGGGAATGATACAAAAGCCGAGATCTTCCGGTCGATCTGCGATGAGTGCTCGAAGCGTTT
CAAGTGAAAACTCGCGACTATAGGCAACGTTTCCAAGGTTAATTGCTTCGTGGATTCGCG
GTAGGCGCGGCAGTTGGAGCACTTTATCTTCGCTGCAGAACCAAGATGCTCAGCTCTAGT
GAATCGTTCCAAGCAAGCTTGTAAAGACCCGGGTCCTGCCACGTCGAGGCTAATGTCCCA
GAATGGATCGATCGTGGTGGAGACACCTGAACATGACGTGCATACGACGTCGCTTTGTAA
CCCGCCCGTGAATATTTGATCGATAATGCAATTGCAACGGCCGTTCTCCTTCTTTTCTGT
ATCATCTACACCATTTGTACAATGTCTATGTAACACATCCAGAGTGGCAATAAAGAATTC
GTGAGCATCCTGTTGTTCGTATCCCGCCAAATGACGTGCATGCGTCCATATTAAATGCAG
TAAACGATGTAAAGTTAACGGAGTTTTTGCTCCAGAATAAAACTCCTGAAACAATTTGGA
GACTTCGCATACCAAGCATTTGTTGGAGCTTTGTGATTTGCATTTGTGTTTTTCTGCTAA
GAAATAATCTCTTAGAAGTGGAGTGTGAATTAAAGTCTGAACAATGCAGTTCATGAAGCA
TGTTGATCCCAGGTTTTGCAGTCCCCGCAGCCCAATAGTGGTGTTTTGGCTGATAAAACG
TCGTTTACGGAGACGACTTAAAGCCACTGCTTCATTGTGATTGGGTAACCATGGCATGAA
AGGCATGCTTATACCGAGAGACTTAGCCTGTTTCGCCTTATGTACAGCTGCAATATCAGT
CAGTTCTCTATCATAAATGTAATCTTGGCATTGAGCACAGAAAACATTTCCATAGCTCAA
ATCAACGTATAGGAAGTGTTTCTTGGATTTAGAGTGTTCTTGAATGTGACCAGCATAGCA
TGCAAAGTAGATGCAGTGGAGACATGAATGCATTCGAGGTCCAGGTTGGCCACACACGAA
GCATAGACATGACGTAGCCTTATATCTTCTTGCTTCATATGATGTACAGGAAACGAAAAA
TGCATGTACAATTTTGTAGGGATTGGTGCCCTTCGCAGCCTTAAAATTATTTAGATGTAT
GCAACCATTGTCATTCATTATTTTAGCTTGTATATTTACCGGGTCGAACAGATATATTTT
CACACATAAATCAGAATAATAGCATTATACGAATATGACAATCACGGTAGGCAACCAAAA
TAATTAATTATTAAAATAAACATTCAAGTGAAAACTCGTAGAGATTTTTGATTAACAAAT
CGAAATCCTATTCCTGTGCTGAAGAATGATGCTGAAGTGAAATAGCAAATACCGGACGGG
GCGCGGGG
(2228 bp)

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