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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23029c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_5-A-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:7.01 TPM:6.86
ORF EntryO_TrvaFAMAMG26311_complete:A_TrvaFAMAMG_TR23029c0_g1_i3
Sequence
(Nucleotide)
TAAAATGTAATTGAATAACCATTTAGTACAAAACAAAACATATTTCTCATTTTAATATTT
TAAAAACTATTCTATACTCTTTTATTTATACAGTAGACATAATAAATTTATTTTTCCAGC
TATGTCATAAATAAACTCTGACAGTACAACAAAAAACTGTTTAAATTAATAAAAATATTA
AAAAAAAATCACAGTAATATCACAGATGAGTTTCTTAAGTTACCAAAATTAGTAAACCAA
CCTGCCGGTTCCAGTCCTGAAAGTAAACATTAGTGTTTAACTAAAAATGTTTCAAACTCA
CCTATTTCCCATCTTCTTGACCCACAACCTCCTTATATCTTGCGATCATGAGCTTCTTCA
CAGTATCCCTGTATGTTTCCCCAGGCGTGGGCGTATAAATTCCACGTTTTTGGCCCAACC
CTGCTAAACTGGGCCGTTGTTCCGCCTCTATTGGGGCGATCCTACCCTGCTCTGTTTTAC
CTAAACCTCGCCCTTCAGACCAGCCCATTTTTTGCAGCATTTTACCCCCGATTGTGTCGA
CTACGTTTGGTGGAGGATGAGGGTTGATCGGCGGACCCATTGGCTCAGGGGGTTCATAGC
GTTTTCTTATTATAGGAGCGTCATCTTCACCGAATTTCATTCTTCGTTCAGCCGCACGGT
CTCTATAACCATTCATCTGCGGTATCAAGTCATTCTTCTTTCTGAATTCGGCTAGATTTT
GCTTGTGTAAGTCTGACATGGTTTTGTGTTTGTTCAATACATCTACGGAGGGGAATTTTC
TTTTACACAGCAGGCAAGTCAGCTTGGCCCAGTCAATAATATCATCATCATTCTCTACCA
CTGGTTCTGTGATCTTTTTGATGAGGAATTCATCAGTGGTAGGTGGTGGTGATATTTCTC
TGACATGGGTCAATGCTGGGCCAGCGCCTAGGACTGAGAAGCCAATGTCAGCTGAGCCTT
TACTCGCAGTATTATCTGTTGGTTGTTCCATTACAATATTACTCCGAGCATTCTCTTTCT
TTTGATTCAATGTTTTCGCCCACCGTTCCATATCCTTAGCTATTTTCTTAGCAACTTTGA
CTTTGTCTTCTTTTTCACCTCGTTTTTTGCCATCAGGCTCTTTTCCTTCCTTCTGTTTAT
GCTGTTCTGCATTCTGAGCTTGAGAAACAGCATGATACGTACTAGTCTTGCCATCCCAAT
ACAAGTACTGACTGATCTGACTGTTGTAGAAATACTGTGTCTTCCCATCGTAATACAAAC
AAGTGGATGGATCGTAATAGAACCCTGAAGATTCATCATATAGGAATGTTCTTACGTCTG
GAGCGGGGTATACTGTTTTACCGTCTCCTGTGGGAATATTGGTTGTGCTAGATTGAGAGG
TGTGAGAACTGGTGACTGGAGTCCATGATAGCTGCCTGGCTTGAGCCGCAGATATAGCAG
ACTGGGCAACTGCGGCTGCAGCATTCACTCTATCTGCCTCTGACATTGCCTGCGTTGTCG
GATTATTATATACAACTACTTGCGGCGGGTAATAAGGTGTATAGTCTTGGTACTTAACCA
TTTTTTTGTCATTGCAATAAGAAATGAGAACTTCTCGACCATCTATATGCAATGGTGGTT
GTAAACTGACTAACTCAGTATGTGCTGCTGTTGAGTCAGCTATGGAGTTGAAGCTGATGT
AGGCAAGACACTTCGATGCTCCCGTCAAACTCTCTCGACCAATTGAGATGCCCACAATAG
AATCAAGAATCTCTTTAGAGCACCGTTTTTTGAGCTCCTCCAGAATTTTCTCTTCAGTAG
TCAAAGCATCAAGTCTACGGAACAGTAATTTTTTGGTGATGCCCTCAGATCCACGTTCAC
CATCCAAGTATAGTACACCTTCAGCTCTCGTGCCATTACAGGTGCGACGGTAGCAGACCT
GTCGTCTTTTGAAATTGTACAGGCCACAGCGGCATATCCAGTCACCAGGAGAAGATCTCC
CGTAGTCCTCATGTGGCCTGTGCTCCTCATGGTGTTCCTTCTCTATCTCCATGTCAGTGA
CTTTCTCTCGGCTTTTAGAGCGGCTGCGACGCGGGCTCCTGTCGTCCGTGATGATGGGCG
GCGGGGGAGGCGGTGGTGGGGGGGAAGAGTCCTCATGTCGTTTGCGGTCACGATCGCGTT
CCCGTTGACGATCGCGATCTCTATCGCGTTCATGTCGGTCTCGTCGGTCGCGGCGGTGGT
CCCTGCGCTCGTGCGCGTGTCGGTGGCGAGGCGGCGACCTGCGCTCCGGGCTGACGTGAC
GCACCTCCCAGACGGGCGAGCGCTCCCGCGAATCCCACTTGTTCGCTTCCCACCTCGAGC
CGCGCTCCTCGCGACTACGCCAGGACATCGTGGCCTGCAACACCGCGCACTATCAGATAC
TCATACTCACGATACTATCCCGTCCACCATGACTGCGCAATGCTTTTTCTCAACGGCCTT
TACTCATTCATGTTTACCTGCTGCTACACTTTTATATTCTCACTTAAGTAACACTGTGGC
TGAATATTGAAATTTAGAATTGATTAATTGCACTTCACTTGGAAATTGTGAAAACATTCA
GTTTTTCAACACTACAAAAAGACACGAGAAAAAGACGCCATATTTA
(2626 bp)

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