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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23021c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
Transcript
Level		FPKM:4.89 TPM:4.79
ORF EntryO_TrvaFAMAMG26274_complete:A_TrvaFAMAMG_TR23021c0_g1_i1
Sequence
(Nucleotide)
CAAAACCAAAACAAAATCTGCAACTCCTGGGATCTTAATTCAGTTATTGAGTTAGAAAAA
AAGAAATTTCAAATTTATTTAATTAGTTCAATAAAGAGAACTAAACTCACTTGAAGACCA
ACTAAATGACACTATACATTGACACAAAATTGAGTTTATCTGATGAGAATGTTGTGTCAA
CTGTGGCTGCGTGGCATCCATCATTACCATTTCTTGCTGTTGGGTCTTACAATCAAGAAA
AAGGTGGATTTGTAACAATATTCCAAGACAATGGACTACCTTTGGAAGGTTGTGAATGGC
CTGTTTTGTCATCAAATCAAGTGACTGCACTAGCTTGGCACCCGACACGGCGTTTATTAG
TTGTTGGTTGGGATGGTGGTGAACTTTACATTTGGCTTGAGTATTCATGGGCCAGATTAG
AAGCACCTCATAATGCAGCTCTAACTAATATTGGATTTAGTTCTGGTGGAGGTAGATTAC
TGGCTTCTGATGCTGCTGGATCACTGTCGGGCTGGCAATCAGGTTCAGGAGCACCACTTA
CATCTTTTCATCACCAACTCGGTGATGTTATTACTCACATCTCCTTCTGTTCACCAAGGC
CAAGTTCTGAATCTTCCATTAGAGGTTTAGCTCGAGCTGCTGTGGCAGGAGATGAAAACG
CCCTTGATGCCCTAGCTGCTTGGAGACCTAGAACTACAGCAAAAATGAAAGAAGGCACCC
AACCTGATAATCACGCATGCTATGCAGCACAAGACAATGGAACAATATTGTACATTGATG
AAACTGGTGCATGCTCAGAAGTTCTGAATGCTCCAGGCAGCATCATGTTTATGGGTATAA
TAAGCAACATATATCTCCTTGTAGCTTGGGACTCAGGTGGTGCATTAAGTTTAACAAGAT
TCATGACATCTGATGATGGTTCACTATCCACAGATACACATGTAAGGATGGCTGCCAGGA
ATGGACAGTCCATTGTTTTGGCAGGAAATTTTTATGTAGCTGTTGTCACTGGCGATAATA
TTGTCAGAGTTTGGGACAGCGAAACTGGAGATAACGATGTTCTACCAAATGAGAATGAAA
AAAAATCTGGTGGAGATACTTTTTCGAGTATCAGTTATTGTAATTTAAGTGACACACTTT
GTTGTGGAACAGCACAAGGTAATTTATATCTCTGGAGAAGAGATTTTCGGAATAATTGGA
AACTTATAAGCAGCACATCTATTAAAGGAACCATTAAAAGCATAAGTTGGGGTTCTGAAG
GTCTAATGAACCCTCTGTTACACGTAAATTGCATTACCAGTGCATATATCCTACGAGAGC
AACCTGTATGCTGGGGTTACTCTCCAAATATATCAATGGTACAGAAATCGGCTAACGAAA
TAGCTATAACACACATAAATGAAGACACAGCAACAATAAACAGCAATATTACTATAAGAG
CTTTTGCTTTCCGAGATCAATACGTTGCCATAGGTGATGGCATGGATATTCAGATTTGGA
TGTGTAACAAAGAGAACGATTTGAAGTATTCAATGATACGAACGTTTCCATGGAAGACAG
ATGTACTGCTACTTAATAATGATGTATTAGTGGGTATAATTAATCCACATATTGAATGCT
ATTCAGTTGCGGGTATCAATCTGGGTAGTCTACCTACTAGCGAAGGTGAAGGAGAGCCAA
TTAGTATATCTCAAACAAATAAATACGTTTTAATCGTGACAATGGATGGTACTCTTAAAT
TAGCTGAAATAACAAAGAAAGGACTGAAAATACCATATCCATCAAAAAACTGCTATCAAG
TCATTGAAGATTTTGGTGAAGTCATGAGAGCATCTGTAAATTGTAATGGTAGATACATTT
GCCTAAGTGTAGCTAATTCTGGCTTAGCCCCTGATCCAAGGATTTATTTGTGGGATGCAG
CAAACGACACAATTACGAACAGTCTTATTTCTGACAGTTCGAAGCCTCCGTATCAAACTG
TTCCTATTGCAATTTTATGGGATAATAATGACCCGAGAATCGTTGCTGTGCATATGAGGT
CAGCAGAATCCGATAAAATCTATTTATTCTTTTGTCATGAGGGTAGGTTACATGAGTACG
TTAATTGGTGTTCTGCAACAGAAGACTATTTGCAAACGGACTTCATTTTATGTTCATTAT
GTAGCCCGCATGTTGCTATATTATCGCAGCAAAATATAAAGAGATTTCTGATGCGTGAAT
TCCAAGACGTAAATTATAATGATTCTAGCTCAGTTAAACAAGTCTTAGATTTTCTGTATT
TTATGACGACGGGAAATTTAGAAAAGGCTGTCGTTGTAGGATCTAATATTTGTGGTGGTA
CAAGTTCAGTGATTTGGGATAGCTTAGCAAAAATGTGCGTTTCTTTAAAAAGACCTGATG
TTGGGTCAATTTGTCTCAGTAAAATGGAAAATATTAAAGGCTCTCTGATGATGCGCAAAG
CTATGAATGATAATAATATGGATGACAATTGTAAGGTTGGAGTGTTAGCCGTAAATCTTG
GCATGACCGAAGAAGCAGAAAAACTTTTTCGTGAAGCTCAAAGGCCTGATCTCATAACTC
GTCTTATATCAGCTAAAGACGGTGGGCTACTCCAAATAATTGAAGGGAACAAAGATGGTG
AAAATATGTTACTAATCAAAAGCGCGCAGCACAAATTAGCTAAACATTTATGGTCTAATG
GAGAAACTAATGCATCAATTAAGTTGTTTGAAAACGCCGGAACTTTAGTGCCACATGTAC
CAAGAATGTTAATTGCCCAAGGACAGACGGCTGTACTCGCTCAGTACGTGACAAATTCAA
ATAACAAAGGTTTGATTACATGGTGGGGACATTATCTAGAAAGTTTAGGGGATTTAGATG
GAGCACTGTCTGCATATGGTAGGGCTGATGATTTTGGGGAACAAACAAGGTTACTTTGTC
ATATGGATCGAATTAGTGAGGCAGAGAAACTATGCCAAAAGAATCGCCCAGCGATGTACC
AAATGGCCCGATATTATGAAATGCAACCAGATAAAACTGAAAATGCTGTGAAGATGTATA
TGAAGTCCGGCGCCATCTCGTCTGCTATTCGTGTTGCAGCTGAAGCTAGTGCTTGGAATC
TTGTTTGGCGTGCCGGATCCAGTTCTCCTACACACGCACTTCATGCAGCTTCTATATTAG
AAAATGCTGGACAAATAGAACAGGCCATTGCATTATATCAAAAAGCGGGTAAAGTTCATA
TGGCGTTAAAGTTAGCTTTGGATTCTGGTGACACAAACGCCATGATTGCTGCAGTCGAAT
CGTTGGGAGATCGAGTAGACCCAGAGGTTGCCCATACTTTGGCTTCACATCTACGAAAAG
CAAATCATCATTCGCATGCAGCAGCGCTATTGGCTACTGCTGGAAAATATGAGGAAGCTT
TAGATTTAGTGGAACAAAGCTCAGCTCCGCTTTCGGAAGAATTAAGCGAAAGATTAGCTG
CTCCTGCTGGCACCAGCGGGCGTGACGCTCTTTTACGTCGCCTTGCTGATGTGTTAGGCA
CTCGTGGTCTTTACCACCAAGCAGCAAAACGACTTGCACATGCTGGAGATAAGGCCGGTG
CGATGCGTTGGCTAATGCGTTCTGGAGACGCAGACCGTATAGCAACGTTTGCAGCAGCCA
CACGCGACCGTAATGCGCAATTGATGGCCGCAGATTATTTGCGACGCCAAGCGGACTGGC
AAACTAGACCGGACCTTATGCGGCATATATTGCATTTCTACACGAGGGCAAAGGCTTACG
GTAAACTAGCGGGTTTCTACGCTGAATGTGCTAAAATGGAGGTTGACGAGTATGATAACT
ATGAGAAAGCACTCGAAGCACTTAAGGAAGCTGTTCGTTGTTTGGCAAGGAGTACTGATT
CGGAAACTGGTTCGCAAACGATGGCTCTTCAAGAACAAAGTACGCTTGTGAAACGGTATC
TCGACGTAAAAAAAACTTTAGAATCGGGAGAGATCAACGCTGGTATTACAGGCGGACAAC
AACTCCTTCGGGCCGTGACGGGTCGCTCCGGACTCGTGACAGAAGAGAAAGTACTTCGAT
TATTACTCAGACATGCTCCTGACCGCAGTGATTTCGAGCAAAAACTGAGAGAAATACAAA
AAGAGTCTACAGACGATGACAGGCAAAGTACAGAATCTCCGAATCATAGTATTGAAGAAA
TAGTTTAACTGTAGTAATAGCTAATCTAACAGCTGTTATATTTTGTTTCAAATATCGAAT
ACTGAAATGATCAATTACTTATTAGACCGCAATGCATCAGTCCGGGTCTGCCTCTAATAA
AATTTGTATGAATCAATCACAACCCACCGCACATTTAAACGGGCCGCAATCTGACTGATA
TTCATTCAATAGTTCTTGATTTGACTGGATGCAGCTAAACCAATAATCCTATTATTTGGT
AAAAAAAAACTTGTGAGCATATCATAGCGTGATAAGCAAAGTATGTGATAAAATTAAGTG
AATTGTTGAGAAACTGTCAATTAACTCCTCCGTCCGTTAGTTTGTAAGAATTATATTTAT
ACATACTGTATTACACCGTGAAAATAAAATATGAATAAAGAAGTAAAAAAAAA
(4613 bp)

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