SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23007c1_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		MDS1_and_EVI1_complex_locus_protein_EVI1_[Papilio_machaon]
Ontology
GO:0000118 C histone deacetylase complex
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0016235 C aggresome
GO:0016607 C nuclear speck
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030154 P cell differentiation
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0034968 P histone lysine methylation
GO:0042803 F protein homodimerization activity
GO:0043069 P negative regulation of programmed cell death
GO:0043231 C intracellular membrane-bounded organelle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046329 P negative regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
GO:0071425 P hematopoietic stem cell proliferation
Transcript
Level		FPKM:3.92 TPM:3.84
ORF EntryO_TrvaFAMAMG26153_complete:A_TrvaFAMAMG_TR23007c1_g2_i1
Sequence
(Nucleotide)
CGTGAAGGCTGGCCGGGTGCGAGCGGTGCGACCACATCGCCCGCGCCCCGTCCGCGTCCC
ATCCGGAAGCCTTGCTGAAACTGGACCGTTTTCTTTTCTTGTTATTATTGAGATCGGCTC
TAAAGTTCTGTTGTTGTCGCGCGCTGAGCCGCTCGCGCTGATAACGCGATGCTACGCCGG
ACTGAGCACGCGCACCTCGCCACGCTCCGACACATCGCGACTTGCTAAATAATCCAACCC
CCCAATAATGGAATGGATATTTCTATGTGAATTGTGATTGACTCAAACTATTTTTTGTTG
AACTTTTTTTGTGCGTTCGTAGTGACGAAAGTGAAAACGACTGTGCGTAAAGATTTTTTT
TATTGAACCGTAAATTTAGTGCGTAAACTTTTTCGCGCTAAAAATATTGTTGAGGATACG
GATAAGCGCGTGGAGTGCGAGCTTTCAAGATTGAGTTTTTCATCCACCAGAGTGAAACCA
ACGCCGCCAAGCTGACTACCGCAAATGAGGTTAGACCCTGCAACAACGTCCAAGCGTTAA
TAGGTTGGTGGCGCACGAGCCTGATGAGCGCGTGCGCGGCTGCCGCCATGCGCGAAAAGC
ACGCGGCGCCGCGCCGCCTCGCGTCCCCGCCGCGGTCTCCACACGACCGACTGCCCAGCT
CCCCGAGACCTGACGAACCCTTAGATCTCCGAGTCACACACAAGCGTCCGCAACGCATAG
AAGATGAGAACTGTAATTTAATCACACCTTCACCGCCGCCGCATCCTACACATCCTGCTC
ATCCGGCACACCCTGCGCTACTGCGATTTTGTCCGCGGTTACCATTAGCACTACCAGCTT
CGTTTGGAAGGTATCCATTTTTGCCAGCAGCTGCAGCAACTCTACTAACCCCGGGAGCTC
CTCGTCCGCCACCCATTCCACCAAACTCGGGCGTAGCTCGAGCGAGAGATCGATACACGT
GTTCCTATTGCGGCAAAGCATTCCCTCGCAGCGCAAACCTTACAAGACACCTTCGAACCC
ACACAGGTGAGCAGCCGTACCGCTGCAAATACTGCGAACGTTCTTTCTCAATTTCGTCAA
ATCTCCAACGGCACGTGAGGAACATTCATAATAAAGAACGTCCATTCCGATGTCGACACT
GTGATCGTTGTTTTGGTCAGCAAACTAATTTGGACAGACACTTGAAGAAGCACGAAGCGG
AGAATGGTGACGACAGCCGCCGAAGATCTCCAGACGAAACTTACTTTGAGGAGATCAGAT
CGTTTATGGGCCGCGTGGCGCCCGCTCGCCGAGCCGCCGCCGCCGCTACCGCCAGTGCCG
CGGACCACACTTGATAGTGAACTGCGCAGACCACATTCCCCGTTACAATAATCTGGTCGA
TGAATCCAAATGACTCTTTGTATTTACTGGACTACTCGTGTGTTTGCGAATCGTTATTCA
ATAAGTAAAATTTTGTTGTGCGTCAAAATGTATATTTTGCATATGATATTTTATTAAATT
TAAGAAATTGTTTATTTTTGTATTAAATATTCTATAACGAAATTACTGCCACAATCAAAT
TGTCG
(1565 bp)

- SilkBase 1999-2023 -