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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23006c0_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ribonuclease_H2_subunit_A-like_[Plutella_xylostella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0006298 P mismatch repair
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0032299 C ribonuclease H2 complex
GO:0043137 P DNA replication, removal of RNA primer
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:1.51 TPM:1.48
ORF EntryO_TrvaFAMAMG26145_5prime_partial:A_TrvaFAMAMG_TR23006c0_g1_i5
Sequence
(Nucleotide)
CAGTTTGTATTTTGTTGTAGATCAAAATATTTAATTTATTTGGGAATGGATTCGTTACAA
GCGTTACAGGAGGTTATTAAATCCAATGACAATTATTCAAAATTTGTAACAAGGTCCGAG
GTACCAAAGATTTGCAAAGATGAACCATGCATGCTGGGTGTTGATGAAGCGGGTCGTGGA
CCAGTATTAGGTCCAATGGTGTATGGAGTTGCATATTGTCCAGTAAATCAAAAGGCAGTA
TTAGAAGCGCTGGGTTGCGCTGACTCTAAAGCGCTTACTGAAGCTAAAAGAGATGAAATA
TTTACTAAAATGTTGACCGAAGATGATAGCCTCAACAATGTAGGTTGGACTGCCGAGGTC
ATATCACCTAATTACATTTCTAATTCAATGTATAGACGAGCTAAATGTTCACTTAACGAA
GTATCAATGAATTCTGCTATAGATTTAATTAAAAAAGTAGCTGAAAGTGGTGCAAATATC
ACAGAAGTGTATGTGGACACAGTGGGACCTCCTGAGAAATATCAAGCAAAACTGTCTGAA
ATATTTCCTAGTTACAAAATAACTGTAGCCAAGAAAGCTGACTCCATCTACCCTATCGTA
TCAGCAGCAAGTATAGTAGCTAAAGTAACGAGGGATCATGCATTAAAAGTTTGGAGATTT
AAGGAAGGACTAGAAATGGATCACACTGAATTTGGAAGTGGATATCCAGGAGATCCTCTG
ACGAAGAAATTTATACGCGACCAAATTGATAATGTATTTGGATATCCACTTTTGGTTCGA
TTCAGTTGGTCCACAGCAGAACTTATGTTGCAAGAGAAAGCAGCCATTTGCACGTTTGAA
GACGTTGACGATCCCAGCACTGGGAAAAAAGGAAATACGAAATCCATTAGTTCATTTTTC
ACACAAAAGACTGACGACAGTAAACCTCGTAAAAGACATAAGTTTTTTGAAGAGAGACAT
TTAAGTATGGGAGATGCTTTTGAATAAATTTTATTATAAACTTAAAA
(1007 bp)

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