SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22999c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_RecQ_Helicase_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000733 P obsolete DNA strand renaturation
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0008026 F helicase activity
GO:0008150 P biological_process
GO:0009378 F four-way junction helicase activity
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0036310 F ATP-dependent DNA/DNA annealing activity
GO:0043140 F 3'-5' DNA helicase activity
Transcript
Level		FPKM:3.45 TPM:3.38
ORF EntryO_TrvaFAMAMG26111_complete:A_TrvaFAMAMG_TR22999c0_g1_i1
Sequence
(Nucleotide)
GGCCGAACCCCTCTGAAATCACAACAGAGAAACTCTCACTCCCCTCGAAAAAGTTTGCAT
TGGTTTCCGTAATCCGGAAGTATGAACGAACTCGATTTGATCAAGGAAGTAGAAAAACGT
CCTATACTCTATGACAAATCGGTGAGTGGATTCAACAAAACGAAGCTTCGAGATGACGCA
TGGAAAGAAGTGCAAGAAGCTCTCAATGTTACTGATCATGTGACAGAGTCAGAGTGTAAG
AAGCGCTGGAGATCACTTCGCGATTCATTTATAAAGTTGCAGCGAACACACGGTGGTCGT
ACGAGGTGGCCTTACCATCAAGCGATGCGCTTTCTACTACCCCATATAGAACCTAAAGTT
GATACAGGGCCCAAAAAGGAGGAAGACTCAGATGCAGAAGAGGAGGCAGCCAGACAACGA
GCCATACAGAGCCTTCCCGATTTCTCGTTCAGCAACGACAAGTACGAAGAAGACGAATAC
TCAGAGCCTTCGCCGAAGAAACAACGTCTCAACTCCACAGACGAGGAGTCCTGTCAACAT
TGTAACAGAACGGACCCTGACGAGCTCTTTCTACTCAGTTGCGCGCCAACACTGAAACGA
TTGAACTCGAAGAAGAACGCCGCAGCCCGTTTGAAGATACAACAAGTTTTGTATGAAGCT
GCGTTTGGAAGAGAAATGGAAACGCCGACCACTGATGCGTATGAAGAACAAGACGAATAA
AATCGTTAAACTAGAATGCAATGTCGCGTAACTTTTGACAATGGCAAAATGATATCCCAA
AATGATTGCTACGATTATTTGCGTTCGACTTTATGTGCATTTCGATGTAGATTTCGTAGA
ACTTGTTATCTATGTATTAATTCAAATGAATACGGATTAGCTATCGAAATGCATATATAG
TTTTTGAAAAAAGTTACGCAATGTATCGCAGTTAAAAAATAATTTATATATTTAGATAAA
GTGAACCACTATGACCCGAATTTATACCCTTCGAAAATAGATGCTCTACAGCTAAATAAC
TTGTAATAATAACGAATGTATTTTTGAAAATGTCGTGTATTGTTAATTGAACTATAGAAA
CTTAGAAACATTTATTTCTTACCCACAATATACCCCATAAACATTGCAGATACTTTTGAT
ACTAGAATTACAATACAACATTCAGTTTAGCCATCAATGTAATATAGATATCAGTGAGTT
TTGTTTTAAATAAAAAAAAAAATAGGATCTTAACCCATAAAATTTAGAATTACAGTCATG
TATTAAAAAAACATTGTCAGAATAAAATATGTTTTACAATTTAGTATTTTATTTATTAAT
CGTCATTATCATCAATTACTATTACTTTTTTTTTATGTTTAGCTTGTAAAGGTGAGTCAG
CTTTTCTTTTTGATGATTTCTTATCTACATCCACAATATCCATAGATGATACAAACTCAG
TTGGCGCCAATCTGTCCAAATCAAAATGAGAATACTTTCTAACAGGCATTTTTAACTTAA
AATTACTATCTTCTACTGCTGCCATTTCTGGACCAATTTTCAAGTAACTTATTGTTGTAT
AAGCCGTGAAATGGAAGTCCTCTATTAAATATCCTGTAACTAACAAGAATGCTACTATAT
CTTCGCCCAGCAGTCGTGAAAAGTTTGGTTCTTTTCCTTTGTGCCTTAAATTAGCTGGTC
CTTTTAAATACCATGCATCAAGTAACTTCTGAGCTGTCAGTTTAGTATCAACTTTCTCAG
CATTTTTTAAAATAGATGCTATAATCTTGCAGTGATTTTCAAGGTCTATATGTTTTAATT
CAGAGGGGCTGTTGCTGCAAACATCACACATTTTGTTGCAATCACTGTCACCCCAGTCTT
CATCAAAATGCTTTGCAATCATCTGTCTTCTACACAGCTTTCCATTGAGACAGTATTTCA
CCATTTCATAAAGATGTTCAGTCCCCGTTTGAGATTGAAACACCATGGTGCTGAGCTTGA
ATACATCTTGCATTCTATACAAAATGATGCATTCTGCTCTTTGCCCATCCCTACCAGATC
TTCCACTTTCCTGGTAATAATTTTCCATGGATTTGCTAATTGTATGGTGGATAACGAACC
TCACATCTGGTTTGTCTATTCCCATGCCGAATGCTACAGTGGCTACAACAGCCTGATAGT
TTTTATCGTGCCATCTTACATGGACTTTTGACCGGAGACTAGCATCTAAGTTGGCATGAT
AGGATGCCACCTTCAAACCTCTTCTGCGTAACCCATCACTGATTTCTTCAGAATCTTTTA
TGCTGTTTGTGTATATGATTCCAGATTGATCTTTGTATCTGTGTTTTAGAAGTTTTTCTA
GTATATTAAGACATTCCTCTTGAGATGCAGGTTTTTCTAGTATTTTGTAGTATAAATTAG
GGCGATTGAATGTAGACTTAATAACTAAACAGCCAGGAATGTTTAATATTTTCTGGACAT
CAGATAAGACATGAGCAGTGGCAGTTGCAGTCAACCCCAACAGTGGGATATTGGGAAAAA
CTTGAGTGAGTATTCCTAAGTACTTATAATCAGGCCTGAAGTCATGCCCCCACTGAGAAC
AACAATGTACCTCATCAATAGCAATCCTCTGCAACCTGCCATCAGTATAGCATTTCTGTA
AATTTGACATGAACCTTTTGCTTTTAGCAAACCGTTCTGGAGTAACATACAACAATTTTA
CTGTAGATGATTTATCTTTCAACATGTTAAGTACTGTATTTGTTTCCTCTTTTGAGCTGG
TACTGGTGATCAGTTTGGCGCTAATATTTTTTTTTCGTGAGAGACCGTACTTGATCCTCC
ATCAGGGAAATCAAGGGTGACACAACCAGTGTGATGCCAGGTTTCACGAGAGCCGGTAGT
TGGTAGCACAAGCTCTTGCCAGCGCCCGTGGGCATCACGACTATCGCATGTTGCCCCGAC
AAAGTCGAATTGATAGCGCTCAACTGCTTCGGACGAAAAGAATTCAAACAGAATCTGTCT
TTTAAGATATTTTTCACGTCTGTGGACCACTGGTACTCAGTGCCGCCCCAGTCTACGCTC
GCCAGTGTTTCAGATTTTATTTTGTTGATAGTATTTTTTAAATTAGTACGTTTTTCGTGT
AAATTCCTTTGCCTAGATCTCCATTTTTCGATTGCAGCTTCTACTTTAAGTAACTCTTCG
TTAATGCTGTTAAGTTCTCTTTCTATTTCTTCTATCGTCGTCATTTCGCAAAGTTGAAAT
AGAATTTGCTTCAAACATTGATTTTTAGAAAAATGATTTTAAAATACAAATTTAAAATTC
TCTGTCAAGTGAACTCAAGTGCAGTCAAG
(3329 bp)

- SilkBase 1999-2023 -