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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22993c0_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_liprin-alpha-1_[Bombyx_mori]
Ontology
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007160 P cell-matrix adhesion
GO:0007165 P signal transduction
GO:0007269 P neurotransmitter secretion
GO:0014047 P glutamate secretion
GO:0048786 C presynaptic active zone
GO:0051497 P negative regulation of stress fiber assembly
GO:0090005 P negative regulation of protein localization to plasma membrane
Transcript
Level		FPKM:2.74 TPM:2.68
ORF EntryO_TrvaFAMAMG26063_5prime_partial:A_TrvaFAMAMG_TR22993c0_g1_i5
Sequence
(Nucleotide)
CGCCGCCCCCCGCCGCCGACAGCCTGCCCGCCAGCCAGTTACAGTTATGCGAAGACGGAG
TGGGTCTCGGTCCAGGGGAGGGACCGGGCGCGGAGTCCCCGCTGACGGCGCGCTCGCTGC
GCCTGGAGCGGGCTGCACGCGCACTGCACGCCGAGCGCGACAGACTGCGCGCGCACTACC
AGCCGCCTTACGACTCTTCAAGTCAAGAGTCCCTGGGCGGCAGCGCCAGTCCTTGGGGCG
CCGGTGGAACCCCGCGCGGGGTGACGGCCACCTCCTCCGCGGTCTCCATCGCCTCCATGC
ACCAGCAGAAGAAGAGAGGCATCAAGAGCTCGTTAGGGAGACTGTTCAGTAAAAAGGAGA
AGGGGGGATTACCGTTACCTCAGGGTCAAGGATCCCGGTCGCTATCATCAGCGTCATCAC
TAGGTCTGTCATCGTTGGCTGATGAGACGCCGTCAGCTGACCTGTCCCACTTGCCGCTAC
AACACCAAGACTACGCTAGATCTAAGTCCAAAGACCGCGACTACCGGCACGAGCTCCTGG
GCGAGGCGATGCGCGCCGGCACGCCCTTCGCGCTGTGGAACGGTCCCACGGTGGTGGCGT
GGCTGGAGCTGTGGGTCGGCATGCCGGCCTGGTACGTGGCCGCCTGCCGCGCCAACGTCA
AGTCCGGCGCCATCATGTCCGCGCTCTCCGACCAGGAGATACAGAGGGAGATAGGTATAA
GCAACCCCCTGCACCGCCTGAAGCTCCGCCTCGCCATCCAGGAGATGGTGTCCCTGACGT
CCCCGTCGGCGCCGCGCGGGACGGCCTGCGCCGCGCTCGCCTTCGGGGACATGAACCACG
AGTGGATAGGGAACGTGTGGCTGCCTTCCTTAGGTTTACCTCAGTATAGGACGACGTTTA
TGGAATGTTTGGTTGACGCGCGGATGCTGGAACATCTCACGAAGAGAGATCTGCGGACGC
AACTCAAAATGGTCGATAGTTTTCACAGAACGTCCCTCCACTTCGGCGTGGCGTGCCTCA
AGCGCGTCGGATACAGCGTGCGAGTGTTAGAGGAGAGGAGACGTGCAGCCGAGGGGGGCG
GCGCAAGGGACGTGCTCGTGTGGACCAACGAGCGGCTGCAGAGGTGGCTGCATCACATCA
ACCTGAAGGAATACGCCAACAATCTATCAGAGAGCGGAGTGCACGGCGCGCTCATCGCCC
TCGACGACAGCTTCGACGCCAACAGCATGGCGCTCGCGCTGCAGATACCCACGCAGAACA
CGCAGGCTCGTCAGATCCTCGAGCTGGAGTTCTCGAGCCTGCTGGCGAGTGGCACGGAGC
GCGCCGCCCGGCTCCACCACGACCACGCCGTCTCCTGACACAACGTCATCAACTAAACTG
ATACTTACCCTTTGTTAACACGACTCGGTAACTGTTGGGTCTCAATATACAATTGAATCT
ACATGCAAACTATTTATTGGTATAGTTACATGTTAATCCGATAATCACGTTAAATTTACT
TAATAAAACTATTAACACTTTAAGTGAAACTAAACAAGATGGCGTCTGTCTTTTGGCGCC
ATATTTAGGTGATATTTGACAGTTACAGTGTTTATGTGTTAAATACCGTCAAATTTTCGA
TGGAAATCGAATCTTCTAGAAAGCTAATTTAAAATTGTATTGATGATTTTAAAACACTTT
GTGGTCAAAATTGTGTAACCATCGGTCAACAGCTGTATTAATAATTTGATTTATGAGCTT
ACGACTTAAAGATACATTATTTCGTTTAAATTTTTTTACTGCAATCTCAATGACATTCTT
CTGCAACTTAATGACATAACCAATATTGCTATGCCTAAAAAAATCTGAAATTTACGCACA
AATATTGAGCAAAGTATCAATATGTATCGACCCAATACGTTGTCTGAGTTATATTTATAA
AGTGTATTTATCTAATGTGTATTACAGTAGTTAATCGAGATTTTGTATAATATTGTTAAC
ATCACAAGATATCACTTAGACAGTGTTTGTTAAGATCAAGTTAGAACCACCGAAAACTAT
TTATTGCAATGTGTTTGGTAGAGAAAATTACTATTCCAATATGCCTTTAGGTTTTGCAAA
CTTTCTCTTCTTGAATACCATTATTTTAGAAAGTATTGGTCCTTAAAAATGCTTAAAATA
AGAGAATGCTAAAGAAAAGTTAATATTAAAAGATATGATACAATTTTTGCGATGAAATGA
AATGAAATACTTTATTTTCAACATTGATGACATTGTTGACGTCAAAAGTTA
(2271 bp)

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