SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22991c2_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PAX-interacting_protein_1_[Bombyx_mori]
Ontology
GO:0000416 P positive regulation of histone H3-K36 methylation
GO:0001570 P vasculogenesis
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010212 P response to ionizing radiation
GO:0016363 C nuclear matrix
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0031398 P positive regulation of protein ubiquitination
GO:0035066 P positive regulation of histone acetylation
GO:0035097 C histone methyltransferase complex
GO:0043542 P endothelial cell migration
GO:0045830 P positive regulation of isotype switching
GO:0048304 P positive regulation of isotype switching to IgG isotypes
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
GO:0060612 P adipose tissue development
GO:0060717 P chorion development
GO:1902749 P regulation of cell cycle G2/M phase transition
GO:2001022 P positive regulation of response to DNA damage stimulus
Transcript
Level		FPKM:5.76 TPM:5.64
ORF EntryO_TrvaFAMAMG26041_3prime_partial:A_TrvaFAMAMG_TR22991c2_g1_i1
Sequence
(Nucleotide)
GCGCGTTTGCGTGGATTTTCGGCTTTATTTGTTAAATAAACCAAAATGAATAAATAGTTT
AGAAAAGAATATTGCAAATATACTGGTTTAAAAGAAAATGGTAACGATAGTTGACAATTT
AGATTCATTGAGTTTGCAAGAACCTATCTTTCAAGATGTCAAGTATTATGTATCTGGCGA
TGTCTCTGAAAAGGTCCTGCAAATTCTTCAATCAGGAGGTGCAGAGAGCACAAAATATTT
TTCTGACTATGTCACACATTTAATCTGTGGTCAAAATGCTGCCGACAGCGACATTGAAGA
CGCCCAGGAGATATATCAGATACCAGCAGTAACTGAACACTGGGTCTACTCGTGTGCACA
TCTTGGAAAACTTGCATTCACAAAGCCATATATTCCTTACGCCAACAAATTGTTCAGCAA
TGTTGTTGCTTGCATTACTAAAGTAAGCGCAACTGATGCCAAAACATTGTTCGCTCTGAT
CACTTTCCACGGAGGACAAGTTAAACTGAATTTGGACACACAGTGCACTTACTTGATCTG
TGGTTCGGCAAACGGCAAAAAGTACAGTGCAGCACTCAGTTTGCCATCTACTAGAATCAG
AATAGTTACACCTGATTGGGTAACGGAGAGTATTAGAGCAAGAAATCTAGTTTCCACTGA
AGTTTTTCACCCAAAGCTTCTGATTGTTCCCCAACCTCCTCTAAAGTGTATAGACAGGAT
CAGTGCTATAACTGGTTTTGATTTTGAGGAGAGCATTGCCAAAAACGAAGTTCCCACACA
AAACATGACAGAAAGCAAGGACGATACCCAAGCTCTTTTAGACAAGCTCAAACAAAGGAT
GCCTTGGAATCACCCTCCATCAAGCATAAATGCTTCTATGGCTTCTACTGTAGCAGTTAG
TTCTATGGGTTATACTACTTCTCCAATGGCAACCTCGAATACAATGAGTAAAATGCCCCA
AGGCATGGTCACACAGAATGTTCACATCCATTCCAGTCAAGCTAACTCACCATTAATGCA
GAAATTCAGTCAGAACAGTATTGTCTCTCAACCAAATATCAATATACAAAGCCAAGTTAG
TATGAACCAACAGCAAAGCTACCAGAGTGCTCAGCAGCAACAACAACAACAACAACAACA
ACAGCAGCAGCAACAACAACAACAACATCAGCAGCA
(1176 bp)

- SilkBase 1999-2023 -