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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22981c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DNA_repair_protein_RAD51_homolog_3-like_[Papilio_machaon]
Ontology
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000730 P DNA recombinase assembly
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000794 C condensed nuclear chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006312 P mitotic recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007062 P sister chromatid cohesion
GO:0007066 P female meiosis sister chromatid cohesion
GO:0007131 P reciprocal meiotic recombination
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0007596 P blood coagulation
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008821 F crossover junction endodeoxyribonuclease activity
GO:0010212 P response to ionizing radiation
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033065 C Rad51C-XRCC3 complex
GO:0042148 P strand invasion
GO:0048471 C perinuclear region of cytoplasm
GO:0048476 C Holliday junction resolvase complex
GO:0070192 P chromosome organization involved in meiotic cell cycle
Transcript
Level		FPKM:2.60 TPM:2.55
ORF EntryO_TrvaFAMAMG25988_complete:A_TrvaFAMAMG_TR22981c0_g1_i2
Sequence
(Nucleotide)
TTACAATTCTACATTATATTTATTATTAATTAAACTCTGTCTATGTTCCTTATTGTTTTA
TTGTGTATCCCTTATGCCTTCCCTTGTAATCTGAAAATTAGCAACTAAACTTGGTGCGTT
GTTACTTTTGAGAAGCAAAGCAAGCCTAGTTCCACTCGAATCGTTGGACAACAACAGTCG
TTTATTACAACGGTGCGCCCAAGCATCGCCTAAGGACCCTACAACTGAACCGCCTGATAA
ACCAACTCTGGTGCTCATTTCATTTACTAATACTACCGCAATTTGTCTTTCCACTGCAAT
CCTCTGCAAATCAGCCATTTGTCTAAACAAGAGGCCAGTTCTCTTTTGGACTGATATCCC
TTCTTTGAAAGGAAAAGTTATTGAATCAATTACTATTAATTTTACTTTGTGATGTTCACT
TAAAAATGCAGAGATTCTATTCATACAAGCACAAAACTTTTCTAACCCAAATGCATTAAT
GTAATGCAGTCTATCTAATGATTGTTCTTCATTGTACACAAATGATGGCTCAATTTTTTG
ACATTTTGATAAACTTGCAGATAATATTTCTTGAAATCTACCCGGCGTGAAGTTTGTATT
AGTATCAATGTATAATGCTTCTGCGTTCAGTCCGCCTAAAGCGGTTGGTACTTGAACTGA
AGCACATAACTGCAAACATAATTGCGTTTTTCCTGTGCCAGGAAGACCAAGTAGTTCGAT
AAGAGAGCCTAATTGAACCCCATCATTTCCTAGAATTCTATCTAATTTCTGACTGAACGT
TGGAATAGCTGGTAAGCTGGTTTCTCTCTGCCAGAATTCAGCAGCGTTGTATATTTTAAA
CTCACTCATTTTTTTAACTCTATTTCATGATATAAACCTTGATATATATTATACTAGACG
AAATCATATTCAAGTAGAGCAAAACCATATATTTTAAAATTTTTATAACTTTCGAAAATA
AAG
(963 bp)

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