SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22976c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_271-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.11 TPM:1.09
ORF EntryO_TrvaFAMAMG25972_5prime_partial:A_TrvaFAMAMG_TR22976c0_g1_i2
Sequence
(Nucleotide)
GCGAGTTGACAAGCGGGAAATACGAACCGGACACCGACACCACGCCCAGCACTGGACCCG
TCACCTGCGAACAGTGCGGAATAGAACTAAAAGACTTGAGATTATACTCACAACACTTCA
GGAGAGCTCATCCCGATAAAAACAGAACGAAATATCCGGCCATGAAGACGCCTTGTATGT
GTGAACAGTGCGGCAGGATATTCCAGAGTATGGCGTTACTAAAAGACCACATGTGGGTGC
ACACGGGCGAGAAGCGCTTCAAGTGCGACCGCTGCCCGAAGAGCTTCACGCAGAAGACCA
ACCTCATGTTCCACCTGCGCGTGCACAGCGCCACCAGGCCCTCCTACGAGTGTCCGCTCT
GCGGGAAACACTTCGCCTTCTACAATAACAGGAGGCGACATATGTTTATCCACACAGGTC
TGAAGCCGTACAAATGCGAGACGTGTCTGAAGTGCTTCACGACGTCGGGCGAGCTGCGCG
CACACGTCGAGCACGTTCACATGAAGAAGCCCTGGCCGAAGCGGGTGCGCGCACACAGGC
AGCATGACGCTATTGCTGACTCATTGTAGAGGATAATTAGAGTCATTACCAGCTATCTGT
CCTTATGAATGTTTTTTTTAGTAGGATATAATCCACCCTATGTGGGTGTTGAACCGCACT
TAAACCTCAACTCAATCCTGGATGAGGTCAGAAACCCAGCACGTAATTATGTAAGGCAGG
ATGACGCGATATGCACTTAAAATATTATTTCAGAGAAAACTCGCAATTCTACTAAATATC
GAACTGTAGCTAACCGTTTTAAAATAAAAAGAATCTCATAGTTACAATCTTAGTATCAAT
ATAGTTTTGTATTTACTTGAGTATAGTACATAGACCATACTTTATATTTATTTTGATGAA
TAATCATATTTTGTGGGAATGTTA
(924 bp)

- SilkBase 1999-2023 -