SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22964c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcriptional_activator_protein_Pur-alpha_isoform_X3_[Bombyx_mori]
Ontology
GO:0000784 C chromosome, telomeric region
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005737 C cytoplasm
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006270 P DNA replication initiation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007399 P nervous system development
GO:0008134 F transcription factor binding
GO:0008284 P positive regulation of cell population proliferation
GO:0017148 P negative regulation of translation
GO:0030154 P cell differentiation
GO:0030425 C dendrite
GO:0032422 F purine-rich negative regulatory element binding
GO:0042127 P regulation of cell population proliferation
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
Transcript
Level		FPKM:1.50 TPM:1.47
ORF EntryO_TrvaFAMAMG25889_complete:A_TrvaFAMAMG_TR22964c1_g1_i1
Sequence
(Nucleotide)
CGAAATCCCTGGAGTAAACATGGTGCATAATGCGCATGACAGTTGACACTTTGATCGCAG
CGGCATAGTTGGTAATCAGTGCGCGCACTGCACTCGTCCGGCAAGCTGTTGGGTAATCCA
GAATATCATGGTCAAGGCATGGATGCGGGCGGGAATAATTTTGACTCCGGTCAGCAACAA
GAACAAGAGTTGGCAACGAAAATGCTGCAGATCCAGTCCAAAAGATTCTACTTGGATGTA
AAGCAAAACAGGAGGGGTAGATTCATAAAAGTAGCCGAGATTGGAGCAGACGGCAGACGC
AGTCAAGTATTCCTAGCTATGTCAACTGCTGCCGAATTCCGCGACCACCTGTCCAGTTTC
AGCGATTACTACTCATCGCTTGGACCGCCCAATCCGGACAACGTACCTGATGATGGAAAA
CTTAAATCTGAAATGATGTTAAAGGACAACCGACGGTACTACCTGGATTTAAAAGAGAAC
TCCCGTGGTCGTTTTCTTCGCGTTTCTCAGACCATAACCCGAGGTGGGCCTCGCAGTCAG
ATCGCGTTACCAGCCCAGGGCATGATAGAGTTCCGGGACGCGTTAACCGATTTGCTTGAT
GACTTCGGGACTGATGATGGCGGATTCAAAGGCGAGTTGCCCGAAGGTCGACATTTGCGC
GTCGACAACAAGAACTTTTACTTTGACATCGGGCAGAACAACCGCGGGATATACATGAAA
GTGAGCGAGGTGAAGAGTAACTTCCGTACCGCCATCACCGTGCCGGAGAAATGCTGGACA
AGATTCAGGGACATCTTGGCTGATTACTGCGATAAAATGTGCCGGGCTCACCAGCAGAAC
GCTGAGAATCATCAGGGCGGCCCCATGGCAGGCGGGTCGGGAGCGCGCGGCGGTCCATCG
CAAGCGGCGCCTTCAAACTCAGATATAGACACATTTTCATGCAACGTACCGAATCGAATT
TGATGGACGGGTTACCCGGCCTCATCTCGTCGACGCTCGCCGTTCCATTGATCACGATAC
AACATCAACAAGGAGGGACAAATAGCAACAAAATACGCGCGAAAATACAAATTTAGGTTT
ATTTGTAATGTTGGTAGTACTGGGTTTTGTAGAGGGCGTTAGTTTAGATTTTTTTTTGGC
CATTGGTTACACAATCGTGTAGCCTGATTTCTTCTGTTTAAACTACTTTGTTCTGACTTA
TATTTTTTAACTTTATCTATACTTTCCTATCTTGTAGGCACCCTCTGCAATTTCCGATAA
AAGTTGCCAGCCCACAAAATTTAATTTCGAATTTATTTTTGAATTTTCGTGCGTAAACTC
TAAAATTGTAATTCGACTCGCTTAACGGATTATTTTGCAATGAACAGTCGTGAAATGATG
TTGCTTAGATTTTTATCTTTGAAGAGTGGTCTATGGTTTTATTTGCTGTTTGAAAAGTTG
GTATTCTCAAATGAGTTTTAAAAAAAAGTATTTTAGAAAACAGTGATAATTAATAGTTTC
AAACTAAACTACAAATAATAGATAAATTTCTTTGGTAAATGCTATTTTTCTTTATGATTT
TTTTTTTAAGAATACCAATTTTTCTAATATGCAAATGGTAGGTAATGTCGTCGCCTGTGT
GGTTGGGATTTGGCATCGAATTCGGGAGAAATCTATGATGAAACGCTAGCAACACTGAAT
CGAAATGCTTCACACAAGTTTGATGGGCGAACTAACTATAGAAAAGAAACTTTTTGATAA
AATTTCGAAATTGGAAATGAATTTTTTAAATTTATAACAAAATTTTCACTACAATTGGTG
TTGCCGTACTGGCACTCAAAATTTTGGCGTATTTTTTTATTGCGCGTTATTGAATTTTAT
CGCATATTTTTTGGCCTTTTTTGGGGAAATTATTCGCCTCTGAGTAAAACGTTTTTTTGG
GGATAATAGACAGCTTTGAGCTTTATTTTTAAAAACTTTCTATTTTTCTAGTTGTCGCTT
AAGTTTTTCTGGGCACCTAGTGTCTAGAAATTGGCTTCGAAGTTGATTTTTGCAATTTTG
CGAAACCGTAATTTGAAATTGGCATGGAGTCCACAGACAGACTACATTCTTTGAAGCCGT
AAAAAACGAAATAACGTGACGGAATCAAAATTCCCGATAAAGTCGCATATATATTTTTTT
TAATTTTAAGATAATATAGTTCAGCCAGGTTTTTCTTTAAAAAAAATCCCTGGCTTCGTC
GTAAAACATAATAAATGCCACTTATCTAGTTTTTAGGCGTACGAGTTTTTTTATAAGAGT
TATTTAATTATAATTTTTTTTTGTCTGTTTACACTAAGACATGAAAGGCACGGGTGTGAG
CCGGGACATGTCGTGACGTCATAAAAAAAATAGATTTTCTATGAATTTCTGATAACATCT
TGTAGACCATAGAGAAAGGCGTATCGTGTTTGGGAACGCGCAATGAGCATCAAATTACAA
AAGTGATTTGGGTCTGTCAAAATGTTACGCATTCATTGCGTGATTTATATTTGGAATTGA
AACAATCGAGTAATCGTTTCGCATTTTTTTAGTACTAACATCAAAAGTAGAGTGTTCTGA
GTTGGTGAAATGAGTTATCTAGATAACTAGATAGAGAACGACCGAGACAAGAGTGGTCCT
CTTATTATGTTCAAGAAGCGACAATCACCACTTACCATCAAATAGTCCGTTTACCTATCA
AGCAACACAAATACGTCCTTCTCTAATTGTTGCAACGATGACGTCACGGCATGCTCCTCT
GATTACAGCACCGGGTGTTTACAGGGAAGGTAAATACCTAAAAGTCGCGGCCCGCTAAAA
TAGCTTCCAGGAAGCCCCGGGCCGCACTGGAAGTGGTAGTTCTCGAATCAATTAGATAGT
TGACGAGCCGCTGTGATATACGTAGGATGGTATAATCCGATGGATTTAAAAAGATTGTTT
TGGTGCCGGCCGCGGCGTAAGAAAGTGACTTTTCGTGTCGTCGGGTTATCCCCGAGTACC
CTCGTTTAGGTTTTTAAATGGTTCGTCCATTTTGTCTTTAAAAAGACGGTATTAGATTAT
TTTCAAAATTTCCGCCTATTTGTGCGTTTTGCGTACCGCGCGCGGCCGGGCCAAAGGGTT
AGGATAAGTTTGGTTGAGTAAGCACCCTGTGTTAATGCTTTGAGATGGATTTTGTCATCC
GTTTGACTGTAAAAGCGCGTCTTAATTTTATCACGAAAAATAAATAATTTTATGTTTACA
ATCATGGCAGCCCTAAACGATATACGTAAGGTCAACGACCGTTTAAAGGGAATTGTGTGT
CGGTTTTATGGCGCGATGTATCCTGCGCAATTAATGATAGGGTTGACTCAAACATATTTT
TTATAATGTTTTTCTGTAATTACAGTGTTTATAATCGATTTAACTCATAAAATCGCGGGA
CTTTTATTAAGTATCGATTTAAATGGATTTCTTTCGAGCTTTTACGATGAGCTGTGAACG
GACTAGTCAAGCTTTCGAGCCATGAGTCGAATACATAGAAATCCATCGCAAAGACAGAAA
TGTATGTGTGCGCGTGTTTTTTGTATATATATACGTATATATAAGTGCGCAGGACGCGTT
AGTTTAAGTTGAGCACTACAACTGGCGTCAGACGTGCCTTCCAATGTATGCATTTTTATT
CGAAATATCGATATCTTAGCCAAAAACTGACTAACTACACACATACAAAATCTTATTTAA
CATCTTTGCAACGATACTTTGGCTTAGTGTCTTAAAGACCGTGTATCTGTCTTACTTGAC
ATTGGCGAATCGTCCAGAGTCTTGGACGAGGTCCAGCATAAAAAGAAGAAGAAGAAGAAC
ATCTTTATGAAAAACCCCCACAATTTCTCGCTTGAAAATATTCTGAAATCAGCAGTTAAA
TGCTTCTACACAAATGAATAACATCGTAAGATTCTAGTGGCATTATTCAAGAGTTTAAAA
AATATACTGATTTTCGCTGAAGTTCATGAAGTTCATTGCAGAGGTTCATGAGCGACGGTG
ACCGCTTACAATCAGGTGGGCCGTAGGCTCGTGTATCTGTTACGCAATAAAAAAGTAA
(4078 bp)

- SilkBase 1999-2023 -