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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22961c1_g1_i9
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_muscleblind_isoform_X5_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
Transcript
Level		FPKM:3.16 TPM:3.09
ORF EntryO_TrvaFAMAMG25880_complete:A_TrvaFAMAMG_TR22961c1_g1_i9
Sequence
(Nucleotide)
GTTAAACTGTGTATAAAATGATTTCCATTAAAGGATCTAAATGATTACAAAGCATACTTA
ATAAAATTAAACATAATACATGCCTATTGCACAAAAATCTAAATATTGTGTATTTTATGA
GGTCATACAGCCCCAAATATTTTGTAAGCGATAAACGTTCCCACATTACAAAGTCACGTC
ACTCGGCCGCGCGTAGTCAGCTGCTGCTTAGCTTGCCGTTTCGTGTCGCGCTTCTTGTCC
GCTTTTAATGTTTTCGGTTTTATTTAGTTATTTCTGTGATGCAAACCTATTTCTTAACTA
AAATTAACACTATTATTTAATTGTGACAAAAACTGTGCAAAATTACCGTGATATCGGCCT
CCGGACAGCGAATTGAACAAGATTTCATCCTGGAGTCATATATCATTGTAAAAGGAGCTC
CCATTTGAAGTTGAGCCCCGCACCGCACCGGCTTGCTCGCTGACCGCCGAGCCGCTAATC
TAGCTTTTTTCGCGCCCCACCGTCGCCAGCCCAGTTCCACACCGGCAGCCGCAATGCTCG
CGCACCAAGCACAGCTCGCCCTCTACTAAAATCATCAGTCGATACCGATAAACCGCGTGT
GATAACAATAATTTAATACTTGCCTAAATAAGCTTGCAACGTCGGTGTCTTAATTCTAAC
TTAATTGTAAGATTAATCAATTAGTAAGTAACTATCATCGTTTCCGCGCGTCTCCCGCTG
CGGAATATATTTACGCGTGTGCAGTAGTGAGTGATAGTGAGGGTGCGCGAGTGCCGTCAG
TGGCCAAGAGTACAGTCAGCGTCAAGGCAGTGTGAGAAGTGTAAGCAAAGAGCGCGGCGT
CGCGCTCGCCCCTTGTCCCTGCCTATGCGCCGCACTCGCACTGCGTAATTGTGCGCGCGA
CTACCGCCTCCTTTGAACACATAGCCAACGATGGCCACCATGGTGAACATGAATAGCTTA
CTCAACGGAAAGGACTCCCGCTGGTTACAACTTGAAGTATGCCGAGAATTCCAGCGGAAT
AAGTGCTCGCGACCTGACACCGAGTGCAAGTTTGCGCATCCTCCGGCTACTGTCGAGGTT
CAGAATGGAAGAGTCACCGCCTGCTACGACAGTATCAAGGGTCGGTGTAACCGTGAAAAA
CCACCTTGCAAATACTTCCATCCGCCGCAGCACCTCAAGGATCAGCTGTTAATCAACGGC
CGGAATCACCTAGCATTGAAGAACGCATTAATGCAGCAAATGGGTCTGACACCCGGGCAA
GTGTTGCCCGGTCAGGTGCCCGCCGTGGCGACGTCACCGTATCTGTCAGGAGTACCTGGC
GTGGGGTCGACGTACGCTCAGTACTATGCACCTCAGCTGGTGCCCGCGATGCTGGGCCAC
GACCCTGCAGCAGCAGCCGCCTCTCCGCTCGGCGTCATGCAGCAACCTGTGCTGCAACAG
AAATTGCCTCGCACTGATCGCCTCGAGATGGACATGAAGAGCGTCGGTTCCTTCTATTAT
GATAACTTTGCGTTCCCCGGTGTGATGCCGTACAAGCGGCCAGCTGCCGACAAGGCCGGC
GTGCCAGTGTATCAACCGGCGACAACTTACCAGCAACTGATGCAGCTCCAGCAGCCGTTC
GTGCCCGTGTCATTTACTGGACACCCTCCCGGTGTGCCAAGATTTTAATCGGCAAGGATG
TTCAAGACCTACCTGCAGATTCGTTCATATTCGTGAAGGGTGCGGGCTGCAGGTGGTGGG
GTGCCGCGTGGTGGTGTGTCGCGACGCCGCCGCCGGCACGTGTCGCCGCGCCCTCTGTCG
CTACTACCACATACCCGTTCAGTTGCCACCGGCTCTACGTCCTCCCTAACAACCACGCGC
CCTTCCCTCCCCCACGTATACCTACCCACACTCACACACCCACCCCTTCCTAGTATGATC
CTCTTCCCCTTCATCGTCGCCCGCGCCCTGCGTTACCCATATCGATCTCGCCCCTGGCAC
ACTCGGGAAAGGCAGGTTTGGCCGACTGTTACTGTCGCTTCGGCGGCAGAGGTGGTGATA
TTATTGTGGATATCGGTTAGTTTAGATGGTGGGGTCGAGCCGTCGCGGACGTTGCTGCCG
CGGCTCGCTCTCGCCCGGAATGAGCGTAAGTCTTCGGGAAAGAGTGTGTACATAAAGTAG
CGGGATGTGATTCTCAGGCACGGTCATGCGATTGTGATATGAATAGATTTCGGAAAACCG
GAGCCGTATGAAATTATTTGTCGAGATCGTCGAGCGGTAGTTAGTGAGGTTTCAAATATT
TTATGACTAATGTATAATTTTTTAAGAAACGATATGAGTTCCTGTAATAAACCGGGTCTT
CGTTGCCCGGATACTTTGTTGTATATAAGCGATGTGATTTGACCGGTGATGAGAGGAGAC
GTCAAGAAGTACGTCTCTCGGCGACTCCTCGATCAGTGTCAATCTAATACATCACCCCAG
TCCCTGTAAGAGCATTTTTTGTGAGATTTATTTTACTTTTTTACGTATGTTATAAAATTA
CGTTTTTCTAGAGGACAAGTTTACACTAGTTTAGATTTAAGTGAATCAGTAACGAAACAC
CAATAGAGTAGCCGCTTCTCTCCTTCGGCTCGACAATTTGTCGCCGGAGCACAAGTCACA
ACGATGTGTGTAAACGCGGACCTTGTGTTGTACAGTAGTGAACGCCGTCGACCTATATTC
CATAACTATATCCCACGATCACGTACTATACTGTACAACCAGAAATTACGTTATGACGTC
GTTCTCGACGACACGAGTCGTCACTGTGAAGTTTGATTACGACACAGTATCGAGCGGCGC
ATCGGCCTCGGTTAACCCGCGCGCCTACCGCCTCGTCCCGTTCGCACTTTAGAGTCGATC
GCGATACTCGTAGAGTAATAGGAATCATGAATTCGAAATACAATGAAAGTCATCAGACAA
TATTGAAACGAAAAAGGCATACTTCCAAGCTATTTTAGAATAAAAAGTCGGCTTATATTC
CGGATAGATTTTGCTAGAATACCGTTTTATTTACTTAAAATCAGAATCTGTCTATCGATG
CACAAATTGTTACCGATGATCGAGTTCGATCGATGGTGCATTGTGTAATAGCTACGTTAT
TTTCACTATAAACAGTATTAAGGTTTTTATGAAATTTATCTGGTGGTACGTACGTTAGAG
GTGGTATGCGTATAGAGAGAGGCGGAGTGCGTGCGCTAGTCGACGTCCTCTGACTAGCAT
TCGGTTCACTGGTCGCTAATAGTCATGGCCTGAAGTCGGTTGACGGTCACTAGCAGGCAG
TCACCGATTGCTAGTAGTCAGTCACAGATTGTTGGTAGTCGATTGGTCGATTACTAGTAC
TCGGTTGCAGGATACTAGTAATCGATGGTCAGTTGCTAGTCATCAGTTTCTGGCTGATAA
TAATAGTCGATTTTGTATCATTAGCACGCACGCGCTCCGGGGGCATGGAAGCCTGATGCC
TAATATTATTCCTAGTCCATATCCTTTTGTTGATCAGTCATGCGATTAATGTTAGATTTA
AAATAATAATAATTTGATTTATTCCTCCCATTTAGTGGATATTTTGATAATGATATATTA
ATAATGAAATATTTAAGATACATAATACATATTTGATTCTAAATCCTGATAAAGTGACAC
TACTTTAGTAATTTAGTCGGAGGGATACTTGTGCCGTGATTATATTTTTAGGTATATATT
ATGAAATAATTCCTAGCGTCGGAATTAAAGAAGTGATTAATGTGTAAGCGTGTTATGTAT
ATTTATTGTCGTAACGTAAGTGGAATGCCATATCGATAAAAGGTGAATATTGGATGCGGA
GTCAAACTCGTGAGTAGCGTTTGTTTATGTTGATTGGTTGTTGTTGTATCCCGTGCTAGT
GGCTAAGATGAACAGTTCGCTTTTATCAATACGGCACTATGGCTCTATCTATAAGTTGGC
ATTTTTATTTTAAACTTTTTTGTTAAAATTTATCGTTTCTTTGAATATTATTTGATTATT
TGTTACCTATAATTTTACAATCAAAATTTTATGATCTGACGCATTTATTGTAAGACAATC
GATTACTTTTATAATTAATTAATTAGTGTGATAATAATAATTATGGTATGAAATTGCCGA
AATGAAAGATGAACATCGAAAGTATCCTTCCTGTTTAGAAGGGACTATTCTGGCCCAAGG
TTTCTAGTGGATTTTATATTTTTCTTTTGTTGTATTTTTAATGTTGCGTGTGTCTTACAC
ATAATATATTTCATTTTTGTGATATTTTTAACTATAAAGTACTGTTATTGTAAATCCAAA
TGGAATAATGATGACCTAATTTAATATTCAAGAATTTATTTGTAAATCACAAAAAAAAAT
GTAAAACTGTAAATATTATGACAAAAAAATGAACTGCAACACAATAATAATTTACTATTA
TAATAATCTCTCATCAAATAAATTGTAAGTGTTTGAGTACCTAAATAATGGTATCGTAAT
ATGTAGCATATGTATCTACAGACTACTTAAATGTAAACCGGTCCAGTGAACAAATTATGA
TTAATATTGTGATTTTTTTTTATTCACGAACAATCACAGAATAATACATGACATTGTAAT
ATTATTTATGAAATTACTATGTGATGTGATCTTCGGATCAATTTTGAGTACATTATAGAT
AATAAACAACTGAATATGTAAAAAAAAAAA
(4710 bp)

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