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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22961c1_g1_i10
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_muscleblind_isoform_X5_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
Transcript
Level		FPKM:7.12 TPM:6.98
ORF EntryO_TrvaFAMAMG25881_complete:A_TrvaFAMAMG_TR22961c1_g1_i10
Sequence
(Nucleotide)
GGGCCAATGGCGCGCCCACCCGCCCGCCGCCCCACACGTCGCTGCCACTACACCCAGCTC
GCCAGTAGGTTTGTGTCCTTTTGGCTGACCGCATGACTCCGTATCTCGCTTCGTCGCTCT
ACTCGTTGTAACCTGTGTCCGTGCACGCGCTTCAACTTCTCCCTCACGGCAGACGCTGGC
TTCGAAACGCTCGCTTCCTAACCCCGAGTTTGTGAACTGTTCGAACTAAGTTGCGGAACT
TTGAAGTGGGGAAGTGAAGAGTGCAGGCGTCCAGCGCGACGACACAGCCAGGTCTTATTG
CCGCATGATCGCCTGGAGATAATTTGCGACTAGATTTCATCCTGGAGTCATATATCATTG
TAAAAGGAGCTCCCATTTGAAGTTGAGCCCCGCACCGCACCGGCTTGCTCGCTGACCGCC
GAGCCGCTAATCTAGCTTTTTTCGCGCCCCACCGTCGCCAGCCCAGTTCCACACCGGCAG
CCGCAATGCTCGCGCACCAAGCACAGCTCGCCCTCTACTAAAATCATCAGTCGATACCGA
TAAACCGCGTGTGATAACAATAATTTAATACTTGCCTAAATAAGCTTGCAACGTCGGTGT
CTTAATTCTAACTTAATTGTAAGATTAATCAATTAGTAAGTAACTATCATCGTTTCCGCG
CGTCTCCCGCTGCGGAATATATTTACGCGTGTGCAGTAGTGAGTGATAGTGAGGGTGCGC
GAGTGCCGTCAGTGGCCAAGAGTACAGTCAGCGTCAAGGCAGTGTGAGAAGTGTAAGCAA
AGAGCGCGGCGTCGCGCTCGCCCCTTGTCCCTGCCTATGCGCCGCACTCGCACTGCGTAA
TTGTGCGCGCGACTACCGCCTCCTTTGAACACATAGCCAACGATGGCCACCATGGTGAAC
ATGAATAGCTTACTCAACGGAAAGGACTCCCGCTGGTTACAACTTGAAGTATGCCGAGAA
TTCCAGCGGAATAAGTGCTCGCGACCTGACACCGAGTGCAAGTTTGCGCATCCTCCGGCT
ACTGTCGAGGTTCAGAATGGAAGAGTCACCGCCTGCTACGACAGTATCAAGGGTCGGTGT
AACCGTGAAAAACCACCTTGCAAATACTTCCATCCGCCGCAGCACCTCAAGGATCAGCTG
TTAATCAACGGCCGGAATCACCTAGCATTGAAGAACGCATTAATGCAGCAAATGGGTCTG
ACACCCGGGCAAGTGTTGCCCGGTCAGGTGCCCGCCGTGGCGACGTCACCGTATCTGTCA
GGAGTACCTGGCGTGGGGTCGACGTACGCTCAGTACTATGCACCTCAGCTGGTGCCCGCG
ATGCTGGGCCACGACCCTGCAGCAGCAGCCGCCTCTCCGCTCGGCGTCATGCAGCAACCT
GTGCTGCAACAGAAATTGCCTCGCACTGATCGCCTCGAGACGGCCGCAGCAGTGCAGTCG
CCGGCAGCGAGCACAACTTCGGAGACGGGCAAGAAGCGTCCAGCGCCCGCCGAGCTCGAG
CCGCCACCGATGGACATGAAGAGCGTCGGTTCCTTCTATTATGATAACTTTGCGTTCCCC
GGTGTGATGCCGTACAAGCGGCCAGCTGCCGACAAGGCCGGCGTGCCAGTGTATCAACCG
GCGACAACTTACCAGCAACTGATGCAGCTCCAGCAGCCGTTCGTGCCCGTGTCATTTACT
GGACACCCTCCCGGTGTGCCAAGATTTTAATCGGCAAGGATGTTCAAGACCTACCTGCAG
ATTCGTTCATATTCGTGAAGGGTGCGGGCTGCAGGTGGTGGGGTGCCGCGTGGTGGTGTG
TCGCGACGCCGCCGCCGGCACGTGTCGCCGCGCCCTCTGTCGCTACTACCACATACCCGT
TCAGTTGCCACCGGCTCTACGTCCTCCCTAACAACCACGCGCCCTTCCCTCCCCCACGTA
TACCTACCCACACTCACACACCCACCCCTTCCTAGTATGATCCTCTTCCCCTTCATCGTC
GCCCGCGCCCTGCGTTACCCATATCGATCTCGCCCCTGGCACACTCGGGAAAGGCAGGTT
TGGCCGACTGTTACTGTCGCTTCGGCGGCAGAGGTGGTGATATTATTGTGGATATCGGTT
AGTTTAGATGGTGGGGTCGAGCCGTCGCGGACGTTGCTGCCGCGGCTCGCTCTCGCCCGG
AATGAGCGTAAGTCTTCGGGAAAGAGTGTGTACATAAAGTAGCGGGATGTGATTCTCAGG
CACGGTCATGCGATTGTGATATGAATAGATTTCGGAAAACCGGAGCCGTATGAAATTATT
TGTCGAGATCGTCGAGCGGTAGTTAGTGAGGTTTCAAATATTTTATGACTAATGTATAAT
TTTTTAAGAAACGATATGAGTTCCTGTAATAAACCGGGTCTTCGTTGCCCGGATACTTTG
TTGTATATAAGCGATGTGATTTGACCGGTGATGAGAGGAGACGTCAAGAAGTACGTCTCT
CGGCGACTCCTCGATCAGTGTCAATCTAATACATCACCCCAGTCCCTGTAAGAGCATTTT
TTGTGAGATTTATTTTACTTTTTTACGTATGTTATAAAATTACGTTTTTCTAGAGGACAA
GTTTACACTAGTTTAGATTTAAGTGAATCAGTAACGAAACACCAATAGAGTAGCCGCTTC
TCTCCTTCGGCTCGACAATTTGTCGCCGGAGCACAAGTCACAACGATGTGTGTAAACGCG
GACCTTGTGTTGTACAGTAGTGAACGCCGTCGACCTATATTCCATAACTATATCCCACGA
TCACGTACTATACTGTACAACCAGAAATTACGTTATGACGTCGTTCTCGACGACACGAGT
CGTCACTGTGAAGTTTGATTACGACACAGTATCGAGCGGCGCATCGGCCTCGGTTAACCC
GCGCGCCTACCGCCTCGTCCCGTTCGCACTTTAGAGTCGATCGCGATACTCGTAGAGTAA
TAGGAATCATGAATTCGAAATACAATGAAAGTCATCAGACAATATTGAAACGAAAAAGGC
ATACTTCCAAGCTATTTTAGAATAAAAAGTCGGCTTATATTCCGGATAGATTTTGCTAGA
ATACCGTTTTATTTACTTAAAATCAGAATCTGTCTATCGATGCACAAATTGTTACCGATG
ATCGAGTTCGATCGATGGTGCATTGTGTAATAGCTACGTTATTTTCACTATAAACAGTAT
TAAGGTTTTTATGAAATTTATCTGGTGGTACGTACGTTAGAGGTGGTATGCGTATAGAGA
GAGGCGGAGTGCGTGCGCTAGTCGACGTCCTCTGACTAGCATTCGGTTCACTGGTCGCTA
ATAGTCATGGCCTGAAGTCGGTTGACGGTCACTAGCAGGCAGTCACCGATTGCTAGTAGT
CAGTCACAGATTGTTGGTAGTCGATTGGTCGATTACTAGTACTCGGTTGCAGGATACTAG
TAATCGATGGTCAGTTGCTAGTCATCAGTTTCTGGCTGATAATAATAGTCGATTTTGTAT
CATTAGCACGCACGCGCTCCGGGGGCATGGAAGCCTGATGCCTAATATTATTCCTAGTCC
ATATCCTTTTGTTGATCAGTCATGCGATTAATGTTAGATTTAAAATAATAATAATTTGAT
TTATTCCTCCCATTTAGTGGATATTTTGATAATGATATATTAATAATGAAATATTTAAGA
TACATAATACATATTTGATTCTAAATCCTGATAAAGTGACACTACTTTAGTAATTTAGTC
GGAGGGATACTTGTGCCGTGATTATATTTTTAGGTATATATTATGAAATAATTCCTAGCG
TCGGAATTAAAGAAGTGATTAATGTGTAAGCGTGTTATGTATATTTATTGTCGTAACGTA
AGTGGAATGCCATATCGATAAAAGGTGAATATTGGATGCGGAGTCAAACTCGTGAGTAGC
GTTTGTTTATGTTGATTGGTTGTTGTTGTATCCCGTGCTAGTGGCTAAGATGAACAGTTC
GCTTTTATCAATACGGCACTATGGCTCTATCTATAAGTTGGCATTTTTATTTTAAACTTT
TTTGTTAAAATTTATCGTTTCTTTGAATATTATTTGATTATTTGTTACCTATAATTTTAC
AATCAAAATTTTATGATCTGACGCATTTATTGTAAGACAATCGATTACTTTTATAATTAA
TTAATTAGTGTGATAATAATAATTATGGTATGAAATTGCCGAAATGAAAGATGAACATCG
AAAGTATCCTTCCTGTTTAGAAGGGACTATTCTGGCCCAAGGTTTCTAGTGGATTTTATA
TTTTTCTTTTGTTGTATTTTTAATGTTGCGTGTGTCTTACACATAATATATTTCATTTTT
GTGATATTTTTAACTATAAAGTACTGTTATTGTAAATCCAAATGGAATAATGATGACCTA
ATTTAATATTCAAGAATTTATTTGTAAATCACAAAAAAAAATGTAAAACTGTAAATATTA
TGACAAAAAAATGAACTGCAACACAATAATAATTTACTATTATAATAATCTCTCATCAAA
TAAATTGTAAGTGTTTGAGTACCTAAATAATGGTATCGTAATATGTAGCATATGTATCTA
CAGACTACTTAAATGTAAACCGGTCCAGTGAACAAATTATGATTAATATTGTGATTTTTT
TTTATTCACGAACAATCACAGAATAATACATGACATTGTAATATTATTTATGAAATTACT
ATGTGATGTGATCTTCGGATCAATTTTGAGTACATTATAGATAATAAACAACTGAATATG
TAAAAAAAAAAA
(4752 bp)

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