SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22961c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_muscleblind_isoform_X5_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
Transcript
Level		FPKM:11.77 TPM:11.53
ORF EntryO_TrvaFAMAMG25857_complete:A_TrvaFAMAMG_TR22961c1_g1_i1
Sequence
(Nucleotide)
GGGCCAATGGCGCGCCCACCCGCCCGCCGCCCCACACGTCGCTGCCACTACACCCAGCTC
GCCAGTAGGTTTGTGTCCTTTTGGCTGACCGCATGACTCCGTATCTCGCTTCGTCGCTCT
ACTCGTTGTAACCTGTGTCCGTGCACGCGCTTCAACTTCTCCCTCACGGCAGACGCTGGC
TTCGAAACGCTCGCTTCCTAACCCCGAGTTTGTGAACTGTTCGAACTAAGTTGCGGAACT
TTGAAGTGGGGAAGTGAAGAGTGCAGGCGTCCAGCGCGACGACACAGCCAGGTCTTATTG
CCGCATGATCGCCTGGAGATAATTTGCGACTAGATTTCATCCTGGAGTCATATATCATTG
TAAAAGGAGCTCCCATTTGAAGTTGAGCCCCGCACCGCACCGGCTTGCTCGCTGACCGCC
GAGCCGCTAATCTAGCTTTTTTCGCGCCCCACCGTCGCCAGCCCAGTTCCACACCGGCAG
CCGCAATGCTCGCGCACCAAGCACAGCTCGCCCTCTACTAAAATCATCAGTCGATACCGA
TAAACCGCGTGTGATAACAATAATTTAATACTTGCCTAAATAAGCTTGCAACGTCGGTGT
CTTAATTCTAACTTAATTGTAAGATTAATCAATTAGTAAGTAACTATCATCGTTTCCGCG
CGTCTCCCGCTGCGGAATATATTTACGCGTGTGCAGTAGTGAGTGATAGTGAGGGTGCGC
GAGTGCCGTCAGTGGCCAAGAGTACAGTCAGCGTCAAGGCAGTGTGAGAAGTGTAAGCAA
AGAGCGCGGCGTCGCGCTCGCCCCTTGTCCCTGCCTATGCGCCGCACTCGCACTGCGTAA
TTGTGCGCGCGACTACCGCCTCCTTTGAACACATAGCCAACGATGGCCACCATGGTGAAC
ATGAATAGCTTACTCAACGGAAAGGACTCCCGCTGGTTACAACTTGAAGTATGCCGAGAA
TTCCAGCGGAATAAGTGCTCGCGACCTGACACCGAGTGCAAGTTTGCGCATCCTCCGGCT
ACTGTCGAGGTTCAGAATGGAAGAGTCACCGCCTGCTACGACAGTATCAAGGGTCGGTGT
AACCGTGAAAAACCACCTTGCAAATACTTCCATCCGCCGCAGCACCTCAAGGATCAGCTG
TTAATCAACGGCCGGAATCACCTAGCATTGAAGAACGCATTAATGCAGCAAATGGGTCTG
ACACCCGGGCAAGTGTTGCCCGGTCAGGTGCCCGCCGTGGCGACGTCACCGTATCTGTCA
GGAGTACCTGGCGTGGGGTCGACGTACGCTCAGTACTATGCACCTCAGCTGGTGCCCGCG
ATGCTGGGCCACGACCCTGCAGCAGCAGCCGCCTCTCCGCTCGGCGTCATGCAGCAACCT
GTGCTGCAACAGAAATTGCCTCGCACTGATCGCCTCGAGGTAACAATACTTTCCTTTATT
ATCTACACCAGTAGTCTCACTAAATAGCATAATATGCTTCTTGTTGTTGCCACTTTCGCC
GGGGACCGACATTATAACCTAATTAAAGCAAAAAAATCACGAACCCTCCTCAAGTCTTGT
TGCGAAATCAATGTCCTCATCAGCATGTGGAATATATCTAGTTTACAAGAGAAGAGAGAA
AGCGTCAAGTCATGTCGGTCTCCGATGCAGAATCGGCCCCTGAGCCCTATGCCCGTCCCG
TGTCAATGGAATGCGATCGCACTTATAATAAGCATAAGTACGATCGCTTGAGCGCTTTGC
GAGCAGCACTCGCTTAATTCCTATGGTGATGGAACTGAAATCTCGGCAGGCAGTCGATCA
TAACGACACTGATGATAAAAATTCTATTCCCCTGGACTAGTCAATAACTTTTCTAGATTA
TATTTAGGCAACGATAGTATTAACATTATAAATGAAAACTAAATGAATATTGATGCGACG
GATGCGTTAATCGTTAGAATACTAAATTTCAAACGTAAACAAGTTAACCACTCTTGTAAA
TTGAAAAGCGGCGTCCGGTCGAGAAAAGAACAAACCATTGAAATGATTCTTTTTTCGTAC
AATACAGTAATTAAAATTGAGAATCGCGAGCGCGTTGTAAATACAGTAGGGGTAGGGACT
AGGCAAAGGGCAGTTAGAGAGAGCGGGGTGTGCGAGCGGCAGACATATGTGCGGCTGGTG
TGTGGTGGTGCAGGTATGCCGGGAGTTCCAGCGCGGCGCCTGCAAGCGTGCAGAGACCGA
GTGTCGCTTCGCGCACCCGCCGGCTACAGTCGTCGCGCACGATGACGGCTGTGTCACGGT
GTGCATGGACGCCGTCAAGGGCCGCTGCGTCCGAGACCCCTGCCGCTATTTCCACCCTCC
CCTGCACCTGCAGGCGCACCTTAAGGCGCAGGCGCGCGGCGCGGTACGCCACCAGGCTGC
ACGCTCTCGCCTCGCTCGTTCGCGCTCGCTTACATTCTTCCGCTTGCTCGCCGCGACGCC
GCTTAGCTCGCCGGCTTCCTTATGTTCAGTTCGCGCCGGCTCGCGTCACGCTTCCGTCGC
ACTCACGCTTAACTTTTATTTTATTTTATCTTTCGCATAATATCACCTCGTACCGAGCTT
TAGGTGTATTCTGTGCATCTACTACATCGTTACTGTTTCCGTCCCGTCCTGCGACGCTTC
GCTTCACGTAGACGGCCGCAGCAGTGCAGTCGCCGGCAGCGAGCACAACTTCGGAGACGG
GCAAGAAGCGTCCAGCGCCCGCCGAGCTCGAGCCGCCACCGATGGACATGAAGAGCGTCG
GTTCCTTCTATTATGATAACTTTGCGTTCCCCGGTGTGATGCCGTACAAGCGGCCAGCTG
CCGACAAGGCCGGCGTGCCAGTGTATCAACCGGCGACAACTTACCAGCAACTGATGCAGC
TCCAGCAGCCGTTCGTGCCCGTGTCATTTACTGGACACCCTCCCGGTGTGCCAAGATTTT
AATCGGCAAGGATGTTCAAGACCTACCTGCAGATTCGTTCATATTCGTGAAGGGTGCGGG
CTGCAGGTGGTGGGGTGCCGCGTGGTGGTGTGTCGCGACGCCGCCGCCGGCACGTGTCGC
CGCGCCCTCTGTCGCTACTACCACATACCCGTTCAGTTGCCACCGGCTCTACGTCCTCCC
TAACAACCACGCGCCCTTCCCTCCCCCACGTATACCTACCCACACTCACACACCCACCCC
TTCCTAGTATGATCCTCTTCCCCTTCATCGTCGCCCGCGCCCTGCGTTACCCATATCGAT
CTCGCCCCTGGCACACTCGGGAAAGGCAGGTTTGGCCGACTGTTACTGTCGCTTCGGCGG
CAGAGGTGGTGATATTATTGTGGATATCGGTTAGTTTAGATGGTGGGGTCGAGCCGTCGC
GGACGTTGCTGCCGCGGCTCGCTCTCGCCCGGAATGAGCGTAAGTCTTCGGGAAAGAGTG
TGTACATAAAGTAGCGGGATGTGATTCTCAGGCACGGTCATGCGATTGTGATATGAATAG
ATTTCGGAAAACCGGAGCCGTATGAAATTATTTGTCGAGATCGTCGAGCGGTAGTTAGTG
AGGTTTCAAATATTTTATGACTAATGTATAATTTTTTAAGAAACGATATGAGTTCCTGTA
ATAAACCGGGTCTTCGTTGCCCGGATACTTTGTTGTATATAAGCGATGTGATTTGACCGG
TGATGAGAGGAGACGTCAAGAAGTACGTCTCTCGGCGACTCCTCGATCAGTGTCAATCTA
ATACATCACCCCAGTCCCTGTAAGAGCATTTTTTGTGAGATTTATTTTACTTTTTTACGT
ATGTTATAAAATTACGTTTTTCTAGAGGACAAGTTTACACTAGTTTAGATTTAAGTGAAT
CAGTAACGAAACACCAATAGAGTAGCCGCTTCTCTCCTTCGGCTCGACAATTTGTCGCCG
GAGCACAAGTCACAACGATGTGTGTAAACGCGGACCTTGTGTTGTACAGTAGTGAACGCC
GTCGACCTATATTCCATAACTATATCCCACGATCACGTACTATACTGTACAACCAGAAAT
TACGTTATGACGTCGTTCTCGACGACACGAGTCGTCACTGTGAAGTTTGATTACGACACA
GTATCGAGCGGCGCATCGGCCTCGGTTAACCCGCGCGCCTACCGCCTCGTCCCGTTCGCA
CTTTAGAGTCGATCGCGATACTCGTAGAGTAATAGGAATCATGAATTCGAAATACAATGA
AAGTCATCAGACAATATTGAAACGAAAAAGGCATACTTCCAAGCTATTTTAGAATAAAAA
GTCGGCTTATATTCCGGATAGATTTTGCTAGAATACCGTTTTATTTACTTAAAATCAGAA
TCTGTCTATCGATGCACAAATTGTTACCGATGATCGAGTTCGATCGATGGTGCATTGTGT
AATAGCTACGTTATTTTCACTATAAACAGTATTAAGGTTTTTATGAAATTTATCTGGTGG
TACGTACGTTAGAGGTGGTATGCGTATAGAGAGAGGCGGAGTGCGTGCGCTAGTCGACGT
CCTCTGACTAGCATTCGGTTCACTGGTCGCTAATAGTCATGGCCTGAAGTCGGTTGACGG
TCACTAGCAGGCAGTCACCGATTGCTAGTAGTCAGTCACAGATTGTTGGTAGTCGATTGG
TCGATTACTAGTACTCGGTTGCAGGATACTAGTAATCGATGGTCAGTTGCTAGTCATCAG
TTTCTGGCTGATAATAATAGTCGATTTTGTATCATTAGCACGCACGCGCTCCGGGGGCAT
GGAAGCCTGATGCCTAATATTATTCCTAGTCCATATCCTTTTGTTGATCAGTCATGCGAT
TAATGTTAGATTTAAAATAATAATAATTTGATTTATTCCTCCCATTTAGTGGATATTTTG
ATAATGATATATTAATAATGAAATATTTAAGATACATAATACATATTTGATTCTAAATCC
TGATAAAGTGACACTACTTTAGTAATTTAGTCGGAGGGATACTTGTGCCGTGATTATATT
TTTAGGTATATATTATGAAATAATTCCTAGCGTCGGAATTAAAGAAGTGATTAATGTGTA
AGCGTGTTATGTATATTTATTGTCGTAACGTAAGTGGAATGCCATATCGATAAAAGGTGA
ATATTGGATGCGGAGTCAAACTCGTGAGTAGCGTTTGTTTATGTTGATTGGTTGTTGTTG
TATCCCGTGCTAGTGGCTAAGATGAACAGTTCGCTTTTATCAATACGGCACTATGGCTCT
ATCTATAAGTTGGCATTTTTATTTTAAACTTTTTTGTTAAAATTTATCGTTTCTTTGAAT
ATTATTTGATTATTTGTTACCTATAATTTTACAATCAAAATTTTATGATCTGACGCATTT
ATTGTAAGACAATCGATTACTTTTATAATTAATTAATTAGTGTGATAATAATAATTATGG
TATGAAATTGCCGAAATGAAAGATGAACATCGAAAGTATCCTTCCTGTTTAGAAGGGACT
ATTCTGGCCCAAGGTTTCTAGTGGATTTTATATTTTTCTTTTGTTGTATTTTTAATGTTG
CGTGTGTCTTACACATAATATATTTCATTTTTGTGATATTTTTAACTATAAAGTACTGTT
ATTGTAAATCCAAATGGAATAATGATGACCTAATTTAATATTCAAGAATTTATTTGTAAA
TCACAAAAAAAAATGTAAAACTGTAAATATTATGACAAAAAAATGAACTGCAACACAATA
ATAATTTACTATTATAATAATCTCTCATCAAATAAATTGTAAGTGTTTGAGTACCTAAAT
AATGGTATCGTAATATGTAGCATATGTATCTACAGACTACTTAAATGTAAACCGGTCCAG
TGAACAAATTATGATTAATATTGTGATTTTTTTTTATTCACGAACAATCACAGAATAATA
CATGACATTGTAATATTATTTATGAAATTACTATGTGATGTGATCTTCGGATCAATTTTG
AGTACATTATAGATAATAAACAACTGAATATGTAAAAAAAAAAA
(5984 bp)

- SilkBase 1999-2023 -