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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2290c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_insulin-like_growth_factor_2_mRNA-binding_protein_1_isoform_X4_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0010494 C cytoplasmic stress granule
GO:0010610 P regulation of mRNA stability involved in response to stress
GO:0010976 P positive regulation of neuron projection development
GO:0017148 P negative regulation of translation
GO:0022013 P pallium cell proliferation in forebrain
GO:0030027 C lamellipodium
GO:0030175 C filopodium
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0045182 F translation regulator activity
GO:0048027 F mRNA 5'-UTR binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0097150 P neuronal stem cell population maintenance
Transcript
Level		FPKM:0.30 TPM:0.29
ORF EntryO_TrvaFAMAMG1449_complete:A_TrvaFAMAMG_TR2290c0_g1_i3
Sequence
(Nucleotide)
GGGGTGGGGTGTGGGTGCGGGGGGGTGTGTGTTCTGTCGGCCTACTGCTGCTGCGGCGGG
GGCGGCTGGGCGGCGCGGCGACGGCCGGGCGCGCTCGCCTGCGCCACCATGGCACGGATG
CGACGCTGCGCAGACTATTTTGTTCAAATTTTATAATGAACTCGACACAAACTCATCGTA
TGGGAGGTCACTTTCCTCTAAGCGACACGAATTTGTGTATCGGTTGTCTCAATGTTTTCT
CATCCAGCTTCAGATGAACGCTGGACACTGTAGAACGGGCCGACAATGTGCACGGTGGTC
TCGTGCTCCTGTCCTTGGGCTCCCGGCTGCTGTTGCTGTTCCGGCAGCTTGATCAGCGAG
CCGGTCACGCGTTGCAGCTCTCTAACGTTCTGACCGCCCTTGCCGATGATCCGGCCGACT
TGAGACGACGCGACCACGATCTCGACTATTAGTCGCACGTCGTCAGAACCGGACATGAAG
CCCTCCTCTCGCATCTTCTCGAAGATCAGATATTGCGCCTTCCATTGGGCTTCTGGGCTG
CCGACAATGGTAACTTTGCGCTCCTGCTGAGGGTTCTGGGGCTCTTGCTGCTTCTCTACC
TCCAGAGGGGCGATCTTAACCGAAGCGTTGCTGAAGCGAATTATGTTGCGAATGTGAGAG
CCCTTTGTTCCGATAATGGCGCCCACAGCGTTGTTAGGGATGTACAAATATGTAGTTTCC
TGTGAGTCACCGGCCCCCTGCTGCGCCCCTGGTCCGGCCAGAGGTGCGTACATCGGTGGC
TGGAATGGTGGTGGAGCGCCACAGAAGCCGCGTCCAGTGGACATCATAGCCATTGGGTGC
AGTCCAGGGAACATAATGCTTTGTGGTGCAAGCACCTGCAGATCGTTTTCGTAGCTTTGA
CGCAGCTTGGCTGAAATTTGCGACTCCGCCTTGGCCATGTTTTCGATGGATCCTTTAACA
GTTATGATTCTCTCCAAGTTGAAGCTATTGATGTCGTTAATGGAAGATACAGTGATCTTT
GTATCGGTCTCTTGCATGATTCTCTTGATGGTGTTACCGCCTTTGCCGATAATGCGACCA
ATAAGATTGTTGTGGGCCAAAATCTTAAGGCAAATTTCACCTTTATTAGTATTGTTGGCC
TCCTGTTGCATGACTTCGAGGATTCTCTTGCAGGCATTGGTGCAATTTTCGGGATTACCG
TAGATAGTGATGGCCTTCTCTAGAGAACCGACGTTGTCCTTCCTGTGCACGTCGACGCGA
GCGCGGCTCTGCTGGGTGATGAGGCGGATGGTGCTGCCCTGGCGGCCGATGATGGCTCCC
ACCATGTCGCTCTGCACGAGCAGACGCAGCGGGAAGTCGGTGGGTCGCGAGCCGCCGCCA
GCAGCGCCGCCGCCACCGCGGCCGCCGCCAGGTCGTCCGCGCCGCCCGCCCCGGGAGTTC
TGCTCCGCCGCCTCTACCTTAATACGACATCCCTCCAATTCGCATCCGTTAAGACCGTTT
ATGGCTTGCTGCGCCTGCTCTGGGCTCTCGAAGGTGATGAATACCGCTTGGGTGTTGGGA
TCGCGAGTGTTCGCTTTATCGCAATGTTGCACGTTGCCATACTGTGAGAGCAGCGGCTCG
ATGTTATCGAAGCGGATATGCAGAGGTAGCCCACTGATGAGTACCTTTGAGGATCTTTGA
TCATGAAGATCGTCTTGCTCAAATATTTGGTCATGGTCCTCCTGTGATAAATTAAGCTCG
AACTGTTGCTCCATTGGATTAGGTATTATCACACCCGGGTAAATTTTGACGGCTTGTGAG
TACCGCGTTTAAAATAAATCCGGTTTGCGTGAGGTACGCAAAACACTCAGGAACGCTTGA
GATCAGCAGTAGAACTGATCTTTTTTGAATGATTATAATACCGGCAACTTTGAAAAATCA
CACGTGGGCCGGCAAATACGCGGGCAGTATTTTCAATTTAGCATTATATTCTGTTATCGA
AAGGCAGTGAACGGAACGGCACAAAGTGCAAACGACGTCGATGGACGGTTTAACCTATTA
CAGACCGGCGATTACAGAACGGGCTACGGAATACTTCGGAGAAGGGATACAGACGCGTAT
GGCACGTGTGCGCGGCGTGCGTAAGGTTCGTCGGCTATCGAGATCACTACCCAACTGAGC
CGCC
(2164 bp)

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