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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2281c1_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_four_and_a_half_LIM_domains_protein_2_isoform_X2_[Papilio_machaon]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0015629 C actin cytoskeleton
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055014 P atrial cardiac muscle cell development
GO:0055015 P ventricular cardiac muscle cell development
GO:0060347 P heart trabecula formation
Transcript
Level		FPKM:9.27 TPM:9.08
ORF EntryO_TrvaFAMAMG1413_complete:A_TrvaFAMAMG_TR2281c1_g1_i2
Sequence
(Nucleotide)
CGCACGCCGAGACCACCGCCTTCACGGCTCCCACTGTTTAAACTTCACGATAACTTATCA
AATAATTGCATGAAGTCATCGATTAAATTAAGTACCGGTGCGTTAACAATCGTGTCATAT
GTTACGTTGTGTACCAGTGTAGTTTTGTGTTTTGTTTTGTTCGGCTGATTAACGGATACA
GGATGAATGGGACTCCATCTAGGAAGCCTAAAAGTGCTTTTTCTGAAGCGGGTGTACGGA
TAAAGGAAGTGTCAGAAGGCAGGCCCTGCGACAACTGTCCAGAACTTTGTCCCGGTTTTG
TCTCGCACGCGTGGAGAAAAACCTGTAAGTCATGCGGATGTGATCGACTGAAGCACTCGG
TATACCATGAGGAGTTGGGCTCAGTCCGAGACAGACTCGGTCTCCGGGATTCGAGGGTCA
ACCATCACTCTTATGAGAGCCCACCAGGACTTACTGCTAAGCAGACGGAACTGTACTGGC
AATCGCTTTCGGAACGCACTCCGACTGTCACAGGGGGCGCCACCGGTCAGGCAGCATGGC
GCGCTTGGCGTACAAGAGCTTTAGCTTCACAACTACCGAAGCAGGATCTAACGTTGGACC
ATTGCAAACATATTGGAGAGGCCGAACGAAAGCAGTACGAAGACTTTGTGGCTGCCAGGA
ACGAGATTGCTCTTGATATCGGTATCGCTAGTCAACATCACGGTTCTCCAATAGAGTGCA
TGGGCTGTAACAAGTCGATCAAAAGCAGTAGCATCACCATTCTCGCACCGAGGATAGGAG
AAGATGCATTCTTCCACCCAGCATGTTTCTCGTGTTCGGAATGCGATGAATTGCTCGTGG
ACCTCGCTTACTGCAATCTGGACGGGCGGCTGTACTGCGTGCGACATTACTCAGAGAAAC
TGAAGCCGAGGTGTCATGCTTGCGATGAGCTTATTTTCAGCGGTGAATACACCAAGGCCA
TGAACAAGGACTGGCATAGCGGCCACTTCTGCTGCTGGCAGTGCGACGAGTCATTGACCG
GCCAGCGCTATGTCCTTAGGGAAGAGCACCCATACTGCATCAAGTGCTACGAGAGCGTCT
TCGCTAACGGCTGCGAGGAATGCAACAAGATCATCGGCATTGATTCCAAGGATCTGTCGT
ACAAGGACAAACACTGGCACGAGGCCTGCTTCCTCTGCGCCAAGTGTCGCGTCTCTCTCG
TGGACAAACAGTTCGGCTCCAAGCTCGACAAGATCTACTGCGGCAACTGCTACGATGCCC
AATTCGCGAGCCGCTGCGATGGATGCGGTGAAGTTTTCCGTGCTGGAACCAAGAAGATGG
AATACAAGACCAGGCAGTGGCACGAGAAGTGTTTCTGCTGCGTCGTCTGCAAGAACCCGA
TCGGCACCAAGAGTTTCATCCCGCGCGAACAGGAGATCTACTGCGCTGGCTGTTACGAGG
ACAAGTTCGCTACACGTTGCGTTAAGTGTAACAAGATCATCACCCAAGGCGGTGTAACAT
ACAAGAACGAGCCGTGGCATCGCGAGTGCTTCACGTGCACCAACTGCAACACGTCGCTGG
CCGGACAGCGCTTCACGTCGCGCGACGAGAAGCCGTACTGCGCCGAGTGCTTCGGAGAAC
TATTCGCTAAACGATGCACGTCCTGCACCAAGCCTATCACTGGTATCGGCGGCACCCGCT
TCATCTCATTCGAGGACCGACACTGGCACAACGACTGCTTCATCTGCGGCCTCTGCAAGA
CCTCGCTGGTCGGCAAGGGCTTCATCACTCACGAGCAGGACATCATCTGCCCGGAGTGCG
CCAAACAGAAGCTCATGTAAATACATCTGTCTCGCTTCAACGCTTCCACTCTCGCATCGC
TCCATCTCGCTCCCACGTCGTATAACCTCGTAATGTGACGTTTTGTGCTTGTGCAGCGAA
CATACCATACTACCGGTAATCGCTAACGCCAGAGACTGGTGCGCGTTCAAAAAGCAGGAC
ACCTCGAGCGAACTCATTTACGACATCACAGACAAATTTAACTTTCGCAAGGGCAGAGCC
TGTGTCAATACGGTGCCCAAATAACGATATTTTTATTTAATAAAAAAAATGTACGAAAAA
TCACAAAAAAAGTGAATGCACAAAATTTATTTAATTGCTTTTCTATTGAATTTATTATTT
ATATATATTGACTGTTATACTTAGATATTTGTCACTAATAGTCGGACGTTATATACCTAA
TCTGTATTTATTTATGTATTGTGCTAATCGCCATGTTATTTCGCTTTGGCTGTTGTATTA
GTCCTAGATCTATGTACCCTAGTGCGATTCACACGATGCCTTAATAACATATCTAAGTCA
ATTTCGAAATTATATTTTGTTTTAATAAAATTCGTACCACCTTAAAATGTGAATGTTGTG
CCTCTAAATCTTGCCTTCCTTTCTATCAATTCGAGAATCGAAGCGACAGAAAAGGACATT
CGATTTTACAACATTTTAACGTATTTTAAGGCATCTGAGCTGGTATTGCCAGATCTAAAT
ATTATTGTTCATCATTTTATAATCGAACTTAGTAAGTGCTTGTCATATTATAACATAGAG
ATTAAGAAATATATTGACAAAGTATTAATATACTTGTTATATTTTAAGTATTTATTTATA
TACGGGAGTACGCACTTTTTATTCGTGGGGACGCCGATGGTGTTGCTATGTCGCATGTTA
TTTAAAAAAAGAATGAGATTTTAGATGTAGCCATATGCGCCATCGGTTAGTCGCTATCTA
ACACTAAGTATAAGTGACATCTAGTTTTACTAATATAAAAAAAAAAATAATTTTGTTCTC
GAATAAGTAATAATCGTGTTACAATATAATTGAATGTTATCGATATTTTTTACAATGTTA
AATAATATTATAAGAATGTAGAATCTTACGATAAGTGAGTAACATCTGTGTTAAAAAGAA
TAAAAAACTTGAGAGGTGTCATGGGACACCCGAATAGAACGAAGTTCCTTTCGA
(2994 bp)

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