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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22764c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DNA_repair_protein_XRCC3_[Papilio_machaon]
Ontology
GO:0000150 F DNA strand exchange activity
GO:0000166 F nucleotide binding
GO:0000400 F four-way junction DNA binding
GO:0000707 P meiotic DNA recombinase assembly
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005657 C replication fork
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008821 F crossover junction endodeoxyribonuclease activity
GO:0010033 P response to organic substance
GO:0010212 P response to ionizing radiation
GO:0010824 P regulation of centrosome duplication
GO:0033063 C Rad51B-Rad51C-Rad51D-XRCC2 complex
GO:0033065 C Rad51C-XRCC3 complex
GO:0042148 P strand invasion
GO:0048471 C perinuclear region of cytoplasm
GO:0071140 P resolution of mitotic recombination intermediates
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090656 P t-circle formation
Transcript
Level		FPKM:2.20 TPM:2.15
ORF EntryO_TrvaFAMAMG25677_complete:A_TrvaFAMAMG_TR22764c0_g2_i1
Sequence
(Nucleotide)
TTTTTTTATAATAAAAGAAAACGTTTTTATTAAACTTTTAAATATGAATAACAGTTGGAT
TCGAAACGCATTATTATCTATTAACGTATTGTCATAAGTACGTTTGCATTACTAAACGAT
AATTATTTGAAGTTTTTGTCCATAAACGTGGCCATTTTGATATCCCGTTTACTCAGTCCA
TTTACATCGTGTGAAGACAATGTCACCTGTAGCTTATTGTAAACATTGAACCATTCAGGA
TGGTGATCCATTTTCTCGGCCAGGAGCGCTACTCGGCTCATGAATCCAAAAGCTTCATTA
AAATTCTTGAACAGGAACTCTTTTTCTATGGCATCTCTGTTACTTTGTATTTTCCACCCT
GATTCCAGTAAAGGCTTGAGCTCAGATGTCCGCTCCTCTTGCGTAAGTTTGTCCGCCATT
TTCCTTTTACTGGGTGAGGTCGAGGACACACTGGCGTAACAGACGGCGGCTAGGCTGCGA
TTGATCGCCACACTCCGCGCCGGTCGGAGTGGCCTCGAGGGGTGAAAGTGTATCGCTATC
GAACGTGCACTTAACAAATATCCATTCACGAATGTCGTTGTCATCTTATTCATTTAACGA
AAATAATATAGTCGCACTCTTCGACATAAATCACACATGAATCTCGGTGTTTATCCTTAT
ATCAAAAATAATATCAATGTAGTCTTACGAAATGTGCGAATCGAGCAATTACGACTATTA
AACAATACAATAATTATCATAAATCATAACTCTAAAAATACTTGTAAAACATGTCTAGCT
ATTGTTTATTGTAACTCTGGGCTTCAATAAAAACAGCTGTGACACAACATCAAGGAAATA
TGCACCTTATGTCTAGCTCATAAGGATTGTTTTGGAACAAACCCTTTGACAGGTTTTACC
TATTCTATTGATTTGATGAAATTTATATTCTCAATACTTATGTTAATTTACTGTTTGAAT
TCCTTTTGATGTGATTACAAATGAAGCTGATGAGTTATCTAAATCAGGTGCAAATATGAC
GGATATGTCTCTGATAACAAAAGTACCTTGATCATTGCAGATACTTTTGTCAGAATTACA
GTCAACACTAACAGTTTGTGCTGTTTTACTGATTCTTAGTCTTGTGGAAACCATATTTGA
CCAGGCAAGACCTAAAGCTGGATGAACAGTATCAGTTTCATCAAAAGCTGATGTCACCTG
GTTAATACATATAATAGCTACATTGTACTGCTGAGCTAAGCCAATGAGCAATGTTGCAAA
CTCTCTTATATCTTCAGCTCTTTTGACATAGTTAGTGCTCTCAACTCTGAACGGAGCAGC
TACAGAATCAATTATAATCAAAGATACAGATTTTATTTCCAGCAATTTTGGAAGACGGAC
TCTTATACAGATTAGAAAATCATTTGCTTCAGAAATATGTTCAACAAAAACATTTTTTCC
ATAATCTATGTTAGTAGTTCCTTTAGTTGAATTTATGATTTGATTGAATCTTTTCACAGG
AAACAAATCCTCAGTACAAATATAAACAGAAAATTTTGGTAAATTCTGAATTACAGTTTG
AAGAGCTAATTGAGTTTTTCCAGAACCACTTTCACCAAATATTTCAGTGAGTGTTCCCCT
GCGAAATCCTCCACCTAATATAGTATCAATTCTAGTACACCCTGAATTTATTCTATCACT
TTTTTTCTCAAGTAATTCTTTACATGTTCTACTTTTGGAATTTACATGATCTGATATCAT
ATTTTTCAGCAGCTGTATATCTCTTAGATGTAGTTTTGTAAGTCTCTTTATATCCCATAC
AGACAATGTTAATATTTCTTTACTAGTGGATATGCCAGCTCTATCAATAACTTCAAATAA
ATTCATTGGTAAAACATTTCTCAAATCCATTTTCTTTAACACAACTTTTTTTTTTAAAGA
AAAATCTAAAATTTCCGTAAAAGGGTTGTAACAACTAATTATTTAACGGAAAGAAAAGAT
AATAAAGGTCTCCAAACCCCTTTGAGTTTATTAGGTGTCCCTAGTAACATTTAATTAACT
AATTCCACAAAGACATCAAACCAGCATAAAATCAAAATAAAATGGAAAAACTATTTAGAT
TTATGGATACCTATCAGAATTAAGAGAGAATAAGCGGCACTTATTTCATTTCCTTTGATA
GGACTGCTGTGTGGGACTGGAATTGAAAATAATATAATTATTCCAAACCTCAAGTAAACA
ATAATATGCCGGTATCTAACAATAATAATTCCTGTTTTAAAGATAACCCAGAGGTTTCAC
CTTTCAGCACAGACCCATTAATGATTTTCACACAATTTCTTTTTTTTGTAAAATGTAATA
AACTAACACTTAAAAGTTTTATTAAGTTCACAATTAAGTTTGTGGTTATGTTGGTCAGTG
GGGTTCTCCGTTATATTCACGATTACCACAGATTACGAAATTCACATTCAACACGAATTT
GTTGGAAGGACGACAGATGTAACTAGAATGCACCTAGGTCCTAGAGTGTGAGCTACAGAT
GACTAGATATCTAGAGATCTCAGTTCAGTGATTCTTGCACTTTCCAAAATCTGCGGTCTT
GTAAATATTGTGAAAATG
(2598 bp)

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