SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22738c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_nubbin-like_isoform_X2_[Amyelois_transitella]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0042981 P regulation of apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060019 P radial glial cell differentiation
Transcript
Level		FPKM:1.05 TPM:1.03
ORF EntryO_TrvaFAMAMG25633_5prime_partial:A_TrvaFAMAMG_TR22738c0_g2_i1
Sequence
(Nucleotide)
TTTTTTTTTAATAGTCTCTATTGTTTTAATATAACATACAGATTTCTACACATCCACCGA
ACATCTCGGAGCGCTTACTGATATGAGCTCCATACAACCGGGAGATACCGCGGCCATTCA
TAAATAAACTTCACAGTAACACTAATATACTTCTACAGCTAAAACTAGTCCTTCTAGACA
GTGGCCTAACTTACTACTAATAGACACATCTCGGGATACGCCACTGTCTTCAACCCAATC
CTGGTCAATAAGTCCACGCAAAGTGACACAACTCGCGATGAACGAATTCAGCAAAATTAG
GCTCTTCATCAACAATTATTTACACTTAACTTACATATTTACTACCGAAATAATTATATT
ATGACGTTTTACGGAAAAAGTTCAACAAAAATGGTCAACATAGTCTGTAAATTGTAGGGT
GAGATACCCAATTGCGTGCTATATGACTGATATTTTTGATAGTTAAAAACTAGGTCCAGT
ACCCGGTTATTATAAAGGCACATCGACATTTGGAAAAAGATAAATTTTTAAGCATTTTTC
ATTATGACATTATAATAAAATAAAAAATAGGGTATACGTCCGAGATAAAATCCTAAAATC
GATTCCAAACATCGATGTACCACCGAGTACTTCACTAAAAGCGTTCGTCTCGAGACGATA
TATACAGGAGTCGATCCTATGTACAGGAAGATATGTTAAGGTTTCACTCGCGAGGACCAG
GCGGTCTTGCCAAGAGCGCTAGCGGCTGGAGCGCGTGGTTGTGTGCGTGTGCTGACACGT
GCGCGTGTGCGTGAGCGTGTGCGTGGAGAGCCTGGCTGTGTGCGTGCGCCAGGGCCGGCA
GCAGCCCGGCGCCGCTCTCGCCCGTTGGAGGGTTGATGCGCTTCTCCTTCTGTCGCCGAT
TGCAGAACCAGACCCGCACAACCTCCTTCTCCATACAGAGTGAGTCAGCAAGTGCAGCGA
TCTCCTCACTAGTCGGCTTCGGGTTGTGGAGGAACGCCTTCTCCAAGGCGACCCGAACCC
CGGACTCAATCGAGGTCCGTTTCTTGCGTCGCCTTCCCACGGCTTCAGCCAAGCCTGCAC
CCAAACCAGTGCCACCTGCTGGGCCAGTACCGCCCCCTGCTAAGGAGGAGTCGGCATCTT
CAAGCCACTTCTGCAGCAGAGGCTTGAGTTTGCACATGTTTTTGAAGCTCAGGTTGAGAG
CCTCGAACCGCGAGATGGTGGTCTGCGAGAAGTCGTTCCCGTATAACTTGCCCATCGCTA
GACCGACGTCGCCTTGAGTGAACCCTAGTTTAATACGTCGCTGTTTAAATGTCTTAGCGA
AGTGTTCCAACTCCTCAAGATCAGCAGTGTCATCAACAGCAGGTTCTAGGGCACGTGGCT
TGTGCGCATGCGCGTGCAGCGGTGTGTGTGTGTGAGGAGAACGCGCTCGTCCCGACCCTG
GCGTGTGCGGAGTTAGGAAGGCGCCGGCTCCTGGAGGGGTCCGTCGAGGAGATGGTGATC
TGCCTTCTGTGGTAGGTTGTGGTACAACGTTGGCCCGAGCCTGCAACTGCTGGAGTTGTT
GAGCTGCTGCTTGAGCCACTGCTTGTTGGACCTGTGTGTGTAACAGCAAGGAGTGTGCCC
CGTGCTGAGTCAATAACAGATGCTGCAACTGAGCCAGTGCATTGCCGGCACCCGCAGCGT
TAAGTACAGCAGCAGCAGCACTGGCAGCGGAGTGCGGTGGTCCAGGGTGTGAGGGGAGCG
CGGGGTGCGGGAGGGTGGCGGACGGCGCCCGGGGAGGAGAGGGGGGGCGCTCGTCTCCGC
TGATCTCGCCTTCACCGCTTGCAGAGCCATCATGACTGGGAGGCGGAGAAGGCGATTTGA
TGAGTTCGCCAGACTCGTTAAGGTCGAGTACCATCTGAGTGTTGAAGAAACTCGTGACGT
CAGCCCGGCCAGATACGTGGTGAGTCGGCGGCTGGCGTGGCGGCCAGGCGGGCAGGTCAC
GCAGGCGCATGGAGCAGTCGAGCGGCTGGTCTCGGAAGGCCAGCGCGGGCATGGCGCGGC
CACCGCGGGTCTCGGGTCGCGCCGTCTCGCCGCGTCTGATACGTCCGCCCACCG
(2094 bp)

- SilkBase 1999-2023 -