SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22688c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_09047_[Danaus_plexippus]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0019784 F NEDD8-specific protease activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0071108 P protein K48-linked deubiquitination
Transcript
Level		FPKM:13.90 TPM:13.62
ORF EntryO_TrvaFAMAMG25534_complete:A_TrvaFAMAMG_TR22688c0_g1_i1
Sequence
(Nucleotide)
TAACTGTTTTATTTTCATAAATTTTGAATTGGTTTTTCAATAAATATGCGAATATCCCTA
GTGCGAACCAAATCACAGATTAGAAAGATAAACTAAATTGCGAAAATGTTGCGAACCGAG
AGATTGTCTATACTAATGAAAAATTGTCAAAACAAAACATGTGTCATCTCGCAACTGTCA
GTTTTTATTTAAAAATGGCGGACGATGCATCGAGCAGTAGCGGAATTACCGGTAATTCGG
TTGAAAATTCAGTAAACCAAGATGAATTGATAATGAAACAACAGCGCGAAATAGAAAAAG
AGATATCAGAAACAATACCATTAGTCGGCGACATTGAGGAACTGGAAACTTTAGAGAAAG
AATATAACGAGGATCCTGTGTATTTGCTCAAAATTAAAGATTTAGCCTCGAAATACAAAA
GTATTCGGCGAACACGTCCCGATGGCAATTGTTTTTTTCGCGCGTTTTCATACGCATATT
TGGAAAGATTACTGACTGACAAGCAGGAATATGATAAGTTTTATGAAATAGCTAAAAATT
CTAAGGATATTCTGGTCGCTCTGGGCTTCTCGCAGTTCACGGTCGAAGATTTTTACGAAA
CATTCATGGAAGTAATCCAACGAGTAGGTGAACAAGCCAATTCCTCCCCCGAGTCCGTAG
AGGCAGTGAGAGAGGAACTTCACGATAAATTTAACAAGCAAGGCTACTCCGACTACATTG
TGGTGTACCTCCGCCTCATAACCTCTGGTCAACTGCAGACCGATCAGGAATTTTATCAGA
ACTTCATTGAAGGACCACGTACAGTTACCGAATTTTGTAGACAGGAAGTGGAGCCCATGT
ACAAAGAGTCTGATCACATTCATATCATAGCGTTGAGTAATGCACTCAAGGTGTGTGTGA
GAGTCAAGTACATGGATCGCGGTGAAGGGAGTCAGGTGATAGCTCACGATTTTCCAGAAG
GTTCTACCCCTCTAGTCCACTTGTTGTACCGGCCTGGCCACTATGATATACTGTACGCGT
GATCCTACGTTTTATTATAATAAATTATACTTATCTAAAAAAAAAAAAAAAAAAAAAAAT
AAA
(1083 bp)

- SilkBase 1999-2023 -