SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22661c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001227 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006955 P immune response
GO:0007389 P pattern specification process
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0010464 P regulation of mesenchymal cell proliferation
GO:0017015 P regulation of transforming growth factor beta receptor signaling pathway
GO:0030154 P cell differentiation
GO:0030857 P negative regulation of epithelial cell differentiation
GO:0033081 P regulation of T cell differentiation in thymus
GO:0045666 P positive regulation of neuron differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048513 P animal organ development
GO:0048596 P embryonic camera-type eye morphogenesis
GO:0048598 P embryonic morphogenesis
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048752 P semicircular canal morphogenesis
GO:0051150 P regulation of smooth muscle cell differentiation
GO:0051216 P cartilage development
GO:0070888 F E-box binding
GO:0071230 P cellular response to amino acid stimulus
GO:0090103 P cochlea morphogenesis
Transcript
Level		FPKM:1.13 TPM:1.11
ORF EntryO_TrvaFAMAMG25492_3prime_partial:A_TrvaFAMAMG_TR22661c0_g1_i2
Sequence
(Nucleotide)
CGACGCGCACCACACTGCACGTCCGACCGCGCGCGGGCCATGGTCGCGAGAACCGATCAG
AGCATGTTCGGCTGCTATGGTGACAGCTACTCGTACCGCCTGTGGAGCCTGGCCAACGTG
TGGGGCGCCTGCCGATGTGAGTAGTGCCTCGACGCCGGCCCGTCCTCGAACTCTCCCGCT
GACGTCAGCGGAGGCTGTGATTTTCGGTGTAGAACGACGTAATTGCGATTGATAGTCCGC
GAGTTGTGCGACGGGATAGTAGCCGGTGGTCGCGTTCAGTGAGGTGTGAGAACGGTGTCG
CTCAATGAAAGTGCAGAGCGCGCTTATGGGAGTTGGCGGTTGGTATGAGCGCTCGGCGGC
CGCTTGGCTTGCTGACATGAGGAGTAAGCAAGTCCCAACCTCCACCACCTCGGCCAGGCG
GCTTGCGGCCCTAATCCGTCCGCTGGCGGGTGGAGGATCGGAAAGCAAGCCGTCTGAGGA
GGAAGAGGACCGGAGTGGCTCGCCCCTCGGACCCGGAGGTCCCTTCACATGCAGCCAGTG
TCGCGGCACCTACCCCACCCGGGAGCAGCTGGAGCGACATGAGACTCTGCACACGCCCAG
CACACAGACATGCAACATTTGTCACAAGAGCTTCGCAAACGTGTATAGGCTTCAGAGGCA
TATGATCAGCCACAATGAAAGCGCTGATCTTAGGAAATACAAGTGTAATGATTGCGACAA
AGCTTTCAAGTTCAAACATCATCTCAAGGAACATCATAGGATTCACAGCGGCGAGAAACC
ATTCGAGTGCGCTAATTGTGGGAAGAAATTCTCGCACTCTGGCTCTTACTCCAGTCATAT
GACATCGAAGAAGTGCCTAGTAATGAATCTCAAAATGGGTCGAATAAAACCAAACAATCC
GGCTTTGAACCCTAATAGAAGCCCGTCCAGAAAACGAGCTAATGCAATGGTGACATCTCA
GTTAAACAATAATTTACCACCCAACGGAAACAGCTTTTTGCCCATTCTACCAAAATACAA
TGAAGCAGCTGCTTTCTTTGCATCTATGTCATCTCAAGACAGTAGTTTTCATCGTCCACC
ATTGGGGCAGCCACCACTTAACCCATTTTATTTACCCCCTGGACTACCCATGAGTCCAGC
TACTGGCATCACCCCATACAGTTTGAGTCAATTCTTCGAACAGTTAGCATCATCTCAATG
TCCTCCGAGAAAAATGGAACAACCTCCTAGTCCGAAGCACTATACTCAAGAAGCTCCCGA
AGATCTCATTGAAGAAGTTACTGAAGAAGATGACAAGAGATCAGAAGGAAGTGCTGAGTT
GGTCATGGATATTGAGGATGACGAAGGAGTTGCCATTAAAAAAGAAAGAGAAGATCAAGA
T
(1381 bp)

- SilkBase 1999-2023 -