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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22556c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX20_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000387 P spliceosomal snRNP assembly
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
Transcript
Level		FPKM:3.10 TPM:3.04
ORF EntryO_TrvaFAMAMG25433_complete:A_TrvaFAMAMG_TR22556c0_g1_i1
Sequence
(Nucleotide)
GCTCCGTAACATTTTTAATTATCATTTTCAATGACATAAAAAACAAAAAAAATCTGTTAC
TAGCCAATTACGTGATTACAAATTCATTTATTTGTTTATTTTTACATTCGAGAAAGCTCA
TCAATGTAAGCCAAGTATTCAATATGTTTCATGCTACTTTTTAATTTATTGAACCATACA
TAGTAAGCTTCCTTGTTGTTAGTATTTATCATTTGGTCAAAAGGTATTGATTTTTCAAGA
CAGAGTTCACTTTGGTGTATATTTCTAGGTTTGTCTTCTATATTATTCTTACAAGCTGGA
GTCCGAATGTTATTTTGAAACAAATCTATCTGCTTTGATTCCATCTTGTGTTTTGATTTA
TTTTTATAATTCGTTTTGGATTTTGGTACAACTCTGTGGTGACTTGATTTACCAAAACAT
ATAGGAAGGCCAGCTTCCCGCAGAACTTTCTCTAATAAATTTTGCTCATTATCAATAGTT
TCATTGTCATAGTTTTTCTTGCATATACTTTGATCTACACTAAACCAGTTTATATTATCA
TTCTTACAGCTACTAGTAAATTCTTCAACTTTAATATTATGATTATTACATTTTTCTTCC
TCTGTCTTGTTTATGCCATTAGTGGCTGATTTAGATGAAAGATTAAGTGATTGAAAACAT
TTTTCTAAGCCCACTTTCTGAGGTAAATCTTTCTCAAGTGCATGCTCATAAGGAATGTCT
GTTTCTAGTTCATTACCTGTTTGAAATGAACTTAATAAATTAGTAAATGATTCTATTCTA
CATTCTTTTGATGTATTATTATAATTAGTTTGACTTTCGTAACAAGCTTGTGACACTGTA
TCATTTTCTTTAGTCAGTAAACCCCACAATTTGTCTCTCTGTAGATGGCTTTTACCAATT
TGTTCTTTTGATAGTTTTTCACAGTCTTTATCATTTTCATGTTTATCTAGGCCAAAAATG
TCATCTGTCCATAATTCTGTAACTTTGAATGAAGGTGTTAAAAAGTTCAACATATTTTTA
AAATTTTGGCTTTCTTTTCCTTCACTTATTATAGTTATTGCAGTACCGTAGGATCCAAAT
CTTCCTGCTCTTCCAATTCTATGTAAATATGTTTGCCATTCCAATGGAGGTTCAAAGTTA
ATTACCAGATCAATATTAGATCCATCTAAACCTCTTGCAGCCAAGTCTGTTGATATCAAT
ATTCTACATTTATAATCTTGTAATTGTTTCAATGCACATAATCTATCAACCTGTTCTTGT
TGGCCATGTAATAAACTCACAGGCCACTTAGATTTTTTTAACAATCTGTGAAGTTCTGCT
ACTCTGGCTTGATAATTGCAAAATATCAGACACTGTTTAAACTGAATTTTTGTCAACATT
ATAATCAGTTGTTCAAATCTGTTTTGTGTTTGCTTGACTATGTTACTATTGTACTTAACA
ATAGTTACTTTCTGTGTAATACCTATTAGGACATTATTACTATCAGGACAAATATGTTGA
GCATTTTTTACAAATTTCTTAATTATACCATTGCAATCTTCTGAATAAGTTGCACTACTC
ATAATGACTTGCTTTTGTTCAGGTAATGCTGAAAATATATAGTTGATATCATTCAGAAAA
GCTTTTTCCATCAACTTGTCACACTCATCTAAAACAAGAAGCCGCAATGTTGATAAATTC
ATGTGTTTTTCATGAATAAGATGTTTTACTCGACCTGGACTGCCAACAACAATGTGTACT
TTATTTTTAAATTTTGCAATATCTTCAGCAACTGACAGACCTCCCATAACAACTTCTACA
TTTAGACCTTTATAATGTGATCCTAATTGTTTAATTACATCACATATTTGTGCTGCTATC
TCACGAGTAGGTGTCAGTATCATTACTTGCAGACCACTGTTTAAATCCAATTTTTCTAAT
GCAATTATTGTAAATACTGCAGTTTTCCCTGTTCCCGATTTTGCTTCCAATAGTAAATCA
AAACCACATTTGCCAAGAGGAATACTATGAAGTTGTATTGGCGAAGGTCTCTGAAATCCA
GATTGTTGCAGTCCTGCCAATGTTGGTTCTGACAGAAGCATGGAACTGAATGTAACATTT
TCCACTATTTGCACATCTCTAGTTCTAATAGAGTTTTTAATATCATGAGCTAAAGACATA
ATTATTTTTTTCCGTAAACTAAAACAACGTAAACAAAAAGATGAAGTAGGAAAGATATCT
TAGTTTTACTGCAGCCTATTTTCTAGATAATCACAGAAATGTAGTGTAAGGAAAATTTCA
AACATACAAGGTACAATTCGTATTATTAAATTTTAAACAAACTTCAACAACAACAAAAAA
CTTCAAT
(2347 bp)

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