SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22540c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_sphingomyelin_phosphodiesterase_4_[Amyelois_transitella]
Ontology
GO:0000139 C Golgi membrane
GO:0004767 F sphingomyelin phosphodiesterase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0050290 F sphingomyelin phosphodiesterase D activity
Transcript
Level		FPKM:7.06 TPM:6.91
ORF EntryO_TrvaFAMAMG25426_complete:A_TrvaFAMAMG_TR22540c0_g2_i1
Sequence
(Nucleotide)
TCGAAATTGCCGGTTGTGCTTGCATTTCTGGTTGCATTTGCATGAGAAAGAAATTAGTTT
CAGAAACGAAAGAAACATTAAACAATGAAAGTTAAGAATTAAGAACTTCTGAGCGTATTG
TATGATTAAAAACAACATAGAGCAAAATACAAATCTTGGTTTAAAACTATCTAAACTCCA
AAGTTGAAGAGAAACAAAAACATAATTCTGATTGTGATTCTGATACAGCTGTTGAAGAAC
GAAAAACTTCTTTCTTTTGCACCAGTTGACCCTTCTTCAGGATTCTTCTCAAGAATGGCC
CACGATCTAATGAGTCAGTTCTACACAAGTTTGAATTTACCTCTCCAAGAGAAGGTAATT
GAGTTAACTCGAATTATAGACCAATGCGGTTCAACAAAAGATCTACAAACAATATTTCCC
CAGTTGGTCAACAATATCTTCACTTCGTCATTTAGTAGCGGCTGGGATTTAAAAAGCATT
ACATGTGATGTTAATAGATATGATTTCGAAGCTTTATTAAGCTTCTTGGAGCCGCAAGGA
CCAATGTTTCGACTGTGTTATAGATTACTATCTGATGCTCAACTTAAGTATGAATTACCC
CTAAATGTTTTGCCTCTGGATCTTCAAGTAACATTAGAAAGAGGAAGATGTCCTCATTTC
TATGCAGATATGCTAAGTACAGATGCACAGACCATGAATGTGACTGCATTGTCACTAAAT
CCATTTGACTATTACATATTAAATTTTGCATTATACTTAATCAACAACAATCAAAACAAG
AGTTCATGGGAAAATTGGAACAGTGTTTACTTTGCATTGGCATGTGATTATTTGATGCAT
TTTCTACCTCTGGATCCCAATATGCCTGTGCTTCCACACATACCACATTATTCAGGAAAA
GTGCCCATGGCAGCACCTTTGCAAACAGCCAACAGGCCTTTGTACTCACCATCTTTATTA
CTTAAATCAGACTTCTCCAATTCAGTTGTAAACAACCAGTGTTCATCACAGGCACAGTCC
AGAAATGAAGTATGGAGATCTGAAACAGTCTTACAAATTTTTATTGATATTTGGATGAGT
GTTGAGCAATTAAATTCGAGGTCTGTAGAGATGCATCAAAGACCTTATAATATAAATGTT
ACTAGTCCAGAAAGAGTAAGAATAGTAAGAGTGCTTATTAAACATTTGCATTCATTTACG
GCGAAGTATGCCTCGGATCCTGCAGTACATTCTTCTGCATTAAGAAAATACGCCCGCCAG
ATAATGTGTGTTCGTGCATATCACTATGTCAAACATTTGGTTACATCTTGGCCTCTGGAT
GCCTCTTTTAGACTAGTTATGGAACTGTGGCTAAGTCTCATACAACCTTGGAGATATGTT
AACAATAACATTAATCAGGACAGGTTTCCAAGTAATATAAACCAAGAGGAAAATGCTACA
CACCCCTTAGATGCAACATTTACTCAATTTATAGCCGAGAACTTTCCATCATACACTTGC
ATTTTACAGTTGGTTCTCCCGAGATTTTTGAGACTAGATCTCACAACATACAAGAATGCC
ATAATGCTTTTTAGACTGGGAAAAGTATTTTCTCAACAACATTTGGTACCAATTCTACGG
AATTTAGAGAATGCCATACTGGATAATGGACCTGGATTGATGTATTTTTCAGATTCAAAT
CTCAGCAACTCAATTACTGATCAAAGTTACACATACAATGGCATTTCATTACAAAAATGG
GCAACAATTGCAAAACAAGCAATATCGGAATTTAATATGCCTGAAAATTTTGAGTATCAA
CCTATATGGAATGATAGCACGCGACCTTTTGCTGTCGATTTTGTTCAAAAAATAATTTCC
GCAAAAACATTGACTGAAAAGAACATCGAAGACTTTAGTAAAAAAATCAATCTGAATAGC
CAAGGGTTCTGGTCATCTGTGATGCATTGGTTAATGATAGCCCAAGATGAAACTGACGCA
CATTTAGTAGAGTTAAAAAAAGTACTGATTCATTTGGGGACCTCCATACAAAACTACACA
GTGATATTTGGACTAAATGAAACACTCTTGATGCCCCCAGAACCGATAATTGAAGAGAAT
TCTATGGAAAATTCGTCTTTTGTGAATTCAACTGCATTCCCGTCTTCTATAACAAATATG
TTAAGGAATAAATCCACGGATATTCATTATATGGGCAATCCAGACCTTATGCCGATAGCA
TCTTATGAGAGTACAATTTTAGTCCGAATACTGCATCAAATTTCAACAAAAATAAACGAA
ATGTATGGCACAAAATTCATACATTTATGGAACAGACAAGATATTTGGGGATTTGCGGCC
CGAGAAGTACTACAAAAACCATGTATGATACAGAATTACGTAAAGGATTTATCTCATCAC
CACCGCGTCATTCGTCAAGAGTTACCTCCGAGGCTATCGTTAAGGCGTCTCGGTTCGCAG
GCGTTCGTGTTCTGGTTAACTGTAGGCTATTTAATAATGAAACTATTTTCAATCAACGGT
ATTAGTTACATATCAATATTATTTTGTGTATGTTTGTCGTATATATTCATGAAAGCAGCA
TTTAAAATGTTGAAAGTAAGTCGAATTAATCAAAGTTAACAATATATTAATTATTATATT
ATGTTTTTAGAAATAAA
(2657 bp)

- SilkBase 1999-2023 -