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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22255c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_double-strand-break_repair_protein_rad21_homolog_[Bombyx_mori]
Ontology
GO:0000228 C nuclear chromosome
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0008278 C cohesin complex
GO:0016020 C membrane
GO:0016925 P protein sumoylation
GO:0034991 C nuclear meiotic cohesin complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
GO:0071168 P protein localization to chromatin
Transcript
Level		FPKM:27.06 TPM:26.51
ORF EntryO_TrvaFAMAMG25349_complete:A_TrvaFAMAMG_TR22255c0_g1_i1
Sequence
(Nucleotide)
TGAAAACGTAATTGTTGTCATGTTTACGTTGATTCGTTGATCGTGGAAAGTTATTTGATT
TGTGATTAAATTTCTAGGAAAGTGTTAATGTAAGTTGATCAGGAAGTGCCAGTGTCATCA
TGTTTTATGCACATTTTGTGCTGGCCAAGAAGGGCCCGCTGGCCAAGATTTGGCTGGCGG
CCCACTGGGACAAGAAATTGACAAAAGCACACGTTTTTGAAACCAACATCGAGAAGTCTG
TCGATGGTATTTTGAAGCCGAAAGTGAAAATGGCCCTTCGTACCTCTGGACATCTTCTGC
TTGGAGTTGTGAGGATCTACTCAAGGAAGGCTAAATATCTGCTTCAAGACTGTAATGAGG
CATTTGTTAAGATCAAGTTGGCCTTCAGACCTGGAATGGTAGATCTCCCGGAGGAGCACA
GGGAGGCAGCAATGAATGCTATCACTTTGCCCGAGGTCTTCCATGACTTTGACACTGCTA
TGCCAGAGTTAAATGAAGTGGACATTGAGGCTCAGTTTTCTCTAAACCAGTCAAGAGCGG
AAGAGATCACGATGCGTGAAGATTACGGTTCATTGAATCTTGTAACCCATGACGATGGAT
TTGGAGACATGGGTTTTGATACTGATAATCCAGATATAATGAGAGAGGCTATTGGCTCTG
AAGGTGGTCTTGAACAGAGCAATCTCCTTTTTGCGGATGGATCATCTCTAGAATTAGGTG
GCAAGGAATCTAGTTCAAGACCTGGTACAGTGCACCAACGAGCCCTGGAACCAGCCCCTC
ATGCTCCTGTGGATGATGGTTTTGGAGGGACTATTGGAGATGTGCCAGATTTTGGACATG
CGGGAGGACTTTTTGAAGGCGATTTGTTTGGTGACGTCACGGCCGGTGCGAGCGGCAGTG
GTACCTCCTCCGGCATGCCGGGAGCGTCGGCGCAACCTCAGTCTTTGCAGGCGGAGATAG
AGGCGGCGGGCGGTGGAGAGGGCGCGGGGAGGGAGGCCGGAGACGATCCACCGGACTCTG
ATGATGACATGCCCGATCACTACGATGCACCATCACCGCATCACAGTTGGGGTGGTTCAC
CAGTACGTGAAGATCCTCCCGCCGAAGAGGAACCAGTTACAGAAATGGCACCACCGCCCG
TACCGAGACCACCTTCTGTTAGGCCTATGGAAGTGGACGAGGTTCCTGAACCCGCCCCGC
CGACGCCAGGACCTCCCGAAGCGCCTGATAACACAACTCTACTTAATAATGATGAAGAAT
CATTCGCACTTGCACCTGTCGATGCTACTGTACTGAAAGGAATAACAAAAACAAAACGCA
AACGTAAGCTAATTGTTGATGAAATTAAGAACATATCTGGAGAAGAAATGAAGAATCAAC
TTAGCAACACATCAGACATAGTTACAACATTAGACTTGGCCCCTCCCACCAGGCGACTCA
TGCATTGGAAGGAAACCGGGGGCGTTGAGAAACTATTCACATTACCCGCTAGACCTATCC
CTTCAAGGGTTCTGTTCAAGAAATACCAGCGTAATATGACATTACGTAACGAAGGCGAGG
AGGTAGAAGCCAAGTCTCCGGACCCCGAGCCCAGCGTGGCGCGCCGCGGCGGCAGGAAAC
GGAAACATGATGACAATTTACCGCCTCCTGAAACGCCAGCTCCTCAACCTTCAGAATTAG
AAGCTCCAGTACCGATACCACACGAATATGAACCGTCAGTCGGTGGTGTTCTGTCGTCAT
TGGGTCCCCTGACCCCGGGCGGGCTGGGTCCTCTAACGCCGGGAACGTTACTACAGGCCG
CACTCACTCCGCCCTCGTTGGGTCATGGATCTATGACGCCAGGTGGTTTGCAACATGGCG
GCATGACGCCTGCTGGACTACAACACGGCGATCACCAAGAATTAGGAATGACCCCAGCTG
GATTACATCATGGAGGTATGACACCTGGCCTAGGTTTAGATAGTGGAATGACTCCGGGTG
GCCTAGGACACGGAGGACTAACACCAGCAGGCTTACATCATGGCGGCATGACGCCGGGAG
GTTTGGATCACGGTGGAATGACGCCAGTAGGTTTACAACACGGCGGAATGACACCAGCAG
GGTTACAACATGGGGGCATGACGCCGGCGGGTTTGCAACACGGAGGCATGACACCCGCCG
GCCTTCAACATGGCGGCATGACGCCCGCCGGGTTACAACACGGAGGAATGACGCCAGCGG
GACTACAGCACGGAGGCATGACGCCGGCGGGGTTACAGCATGGAGGTGTACCATCGAGCG
CGTTGCTGCAGTCGTCCGCAGTAATGCCGATGATGCCGATGGTGTGCGGCGCGGAGACGG
TGCCGGGTCTGGGCCCGAGTCGCTCCCTGTTGGCGCCGCCCCCCACCGACCATCTCTCGC
ACGCAGTACCGCTCGAACCTCTGCATAATCCGTTAGATGATCATCTACAGAATGGTATGC
AGATGACTAATTTGGGCTATGATGAGCAACATGGTCATCAAAGTCCACAGCATGACTATG
ATCTACCGCCTACACCAGAAAATGCCGAAGAGGGTGAAAGAGAAGCAGGCGAGACAGAGG
AGCAGTTCGAACAACGTGTACTAAACAGACGAGCGGCGCAACTGTTTGCAGTCATGAGAC
CCAAGATAGCCGCCGGTATGACGCTAGGATTCGCGGACCTGGCGCCGCGGCACAATAACA
AGAAACAGGTTGCACAGAAGTTCTACAGTCTTCTTGTCTTGAAGAAATACCAGGTATTGA
AGATAGAACAAGATGAAACATACGGACCTATAACCATCACAAGGGGAGCACAATTTGAAA
CAGAAGCCATTTAAATACAAAATAGCATTATTTATATACTATATTAAATATTTTGTATTT
TAAAAAAATCATTAGATTGTAAAAGATTTTAAGTGGTGAAATGGTGATGTTTTAGTTTGT
ATAAAGTTCATGATTGATGTATGTTGAGCCAAAAATAATGTAAGATGACTCTGTGGATCG
AGTTTGTGGGTAATTTTAATAGTGAAATATTATATTTTGGACCAAATAATACAGATGCTG
ATCTCAAAATTCGGATTCCATTACTGACAGAAAAATATTCACGATCTCGAGCCACAGATG
AACAGATCCAGATTGTGTTTGATAGATGTAGTACGAATAAATGCCTTATTATGTTTTGCT
GTAGGCTAAGTAAAATTATTGTGAGAAAATGTTTTATCTGTTTTGTTGTGTTCAACAGTC
GGCTAGGTAAGCTATTGTTAGATGTGACTTCGAATCTTTAAAATTATGTAGTGTACTGAC
AGCCTTATACAATATTATGTAAAGTTATTTGCACGTACTTTTAAGATTCAGTTATAAATT
ATATTGAACCCATCATGTGCCTAAGAAAAATTTTGTTATGCACATTTCACATAGTATATT
CAAATGATTTATGTATTTCAAGAAAATGTAGATACAAAATTATTGAAAATTGACCAATAT
TATATTTGAAATTTATAATAATTGACAAAGTACAAAAATACTATGCAAAATACTAAATTT
AAAAAAATAATGGGTGATAATTTCGTTTTTACATTTTTTTGAAGTTTTGTTTTTCAAAGT
GAGTATATTCTGATTTTTAATATCTTGGATTATATTCATTTTGAAATCGCGTTGAATTCT
AAAATACTTGCATTTTAAATGCGTGTGTTGTTTTGACACTGTGCAGTAATATTTTCCTTA
GATTTAAGGGTCTACCGGAGTATAAATTATTTATTAGGTTTTTCCGATAATTTGACAAAG
GTACTCTCTTAAATATTTTTAATATATGAAAACATTTGCAATAAATTGTTGAAAGAAAAA
AAAA
(3844 bp)

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