SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22134c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nischarin_[Papilio_polytes]
Ontology
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006006 P glucose metabolic process
GO:0006915 P apoptotic process
GO:0008217 P regulation of blood pressure
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030036 P actin cytoskeleton organization
GO:0030336 P negative regulation of cell migration
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0048243 P norepinephrine secretion
GO:0055037 C recycling endosome
Transcript
Level		FPKM:22.20 TPM:21.75
ORF EntryO_TrvaFAMAMG25300_complete:A_TrvaFAMAMG_TR22134c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTACGATAACATATTTTATTACAATTCTAAATAATATCGTCTCGTTTAA
TTCTAGAATATTCCCTATGACTCGCTTTGCGATAGATCATATCCCCTTAACAAAAATATG
ATAACAGTAGCATTAAAAATATATTTCAAAAATACATATATTTAATATATTAAGCTATAA
AAGCTTTATACAAAATGTTAACAGTGTGAGTTTAGTCAAAGTTTTATACGAGATTGCTTT
ATTTCACCACCTGTAGGTCGATGGTTACTGTCGCTCATGGACCTACATAATGCAATTCTA
CGGCATTCTATTCTTATTTTTTTTTCTTAAGGTAAAATTTCATATAATTTTAGATAAAAC
TCACACCAGTAAAACCCTTATTCTAAACGTTATATCACTGTCAACTTTTATGAAAATTAT
GACTGGTACTGGTCTCTAGGAATGTAGGTATCTTGCCCTCTTTCACCACTCTTAAAGCCT
GCAATACCCTGGCCGTGTCCATCTCCTTCTGAGAAGCTTTCTCGTTGTCCAAACATATCT
CGGACATTCTAGAATTGAACTGCTCTATGACTTTGACTCTGTAATCTATGGTAGAGGCAA
CGGGATTTGCCGTCAGCCATAGATACTCTAAACAAGGCAGTTTGCAAATATTCTGAACTT
CTTCAACATCAGAAATGAGGTTACAACCTAGATTCAAGCTTTCTAAGGAATATAACCTAG
AGAATCCTCGTAAACTCTCAACCTTGTTCTGCGAAAGATCTATTTTGACTATGTTACCTA
TCTTCGCGTGCCAGTTTTCGCACAACGAGAAAGAATTCATTGATAGATCTAGGTCTCTCA
GTTCGTGCAGACTGGATATATCGCATAGTTCAGTCAGTTTGTTAGAAGATAGACTTAGCC
GTTGTAGTTTGGGCACTAGTTTGATGGCCCAATCCACGTTTTCAATGTTGTTGTTGCCGC
AGTTAATCAGTGCTAGTTTCTTCCATTTCACTGTATCGGCAACACTTGAGGGGTCTTTAT
GCAGGATGTCCACTAACAGGAACTCGTTCAAGGAGACCACAGTCGCCGTTAATACTGATA
GATTGACTAGGGTGTCGCGGAGACTACCAACACTTTGTATGCACTTCATCGGAACGCCAA
GTATTCTCAAATCAACCAGAGATTTGAACGGAATGAAATCAAACTCCAGTTCGTTGGGTA
CAATATTGCTCGTTCCATATTTCTCGTAGCTGCCTTCGACATCTAGAGAATGTAGTTGTG
AACAGAAGTCCAGGATGTGGCTGAAATCGTAGGTCTGGTCTTGTTTCTCTGTCGGAGGAC
ATGCTGCCTTCAATCTTTCGCTAATTGCATGCAACTCCAATGGCGTAAACTTGTAAGATT
TCGCGCTCTCCAACAAATTATCACCTTCCAGGAACAAAGTCTTCGCTAAGTCGGCCAACA
GAAACACGATGTCATATTTGTGAAAATCTAAGAAGTGAGCGAATTCAGGCGGCATTGACA
GCTTCAGGTAGTTGAGAATATCTTTGAGATATTGGTCCAGGGCTTCGCGTCGTTGCTCCA
CGAATTTAGGCGTTTTATTCCGAATTACTTTTTTGGGCGGAAGTAGTTCTTTAGCCACGC
CATGGTCGGAAACCAATTTATCGTGTAGCTCTACAAAATCATTGTAGCGATGCAAAACGT
GCCAGTTAACCGAACCCACTTTAATGCTGATCTTATAATACGTAACGTTGTCTTTCGTTG
AAGTTTCGTCGACGCTAACAGAACTGCTCTCGTGATATTTGAGAAACGAAGACATTGTGG
CTTACGTATGTAGTTTAGCACTGATTTTACGAGTATTTAGGAGTCACATTTCGTTTAGAA
CGTGATACGTATAAATTTTGCGTTAAATAAATATAAAAAAACAAAATTGAAGGAGGGTAA
AGCAAATGCACACCGTGCGCGCTG
(1944 bp)

- SilkBase 1999-2023 -