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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR22118c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_dimethyladenosine_transferase_[Amyelois_transitella]
Ontology
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005759 C mitochondrial matrix
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0052909 F 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity
Transcript
Level		FPKM:39.65 TPM:38.85
ORF EntryO_TrvaFAMAMG25295_complete:A_TrvaFAMAMG_TR22118c0_g1_i1
Sequence
(Nucleotide)
GTCGCACAATGCTCTGTAATTGGAAAACTAGGCTAGTTTTTATTCTGTATCTTACTAAAC
TAGAAAATCTGTACAATATTAAATCTATGATATTTGTCATTTCTTGTAAATGTCAACTTA
TGTGATTTGTCAAATCCACAATTTTACTTCTGATCGGAAACATCTGATTTTTTTCTAAAG
AAGAGTCCAATTTTCTTTAAAAATGGCTCAAACAGCAGGCGTTAAGCCTATGTCAATAGC
TGGACGAGTTGCCAACGAAAGAGAAAGATGTCTTGGTATGACTGATGCTGAAAGAGCTTG
GCGCAAGCAGTGGCTGAAAGATCAAGTTTTAGCTGCCAATGAACCAGTACACGTAGAAGA
ATACTGGAGAGAACGCACTAATCCTATTCGTCGTTTCTACCGCAAACCCTTGGACGTTAT
CTTTTCTAAATTCTCTCCAATTCTGGGAGAACAACGCGCTTCTTATTACAGATACTTAAC
TGGGAAAGTCGGTTTGATCGGCCTGGCTATATTATCAACGCATTACTACTTCAAATACTT
AGGAAATGATTGGACTAAGAAAGGTGGTTGGAAGGTACTAAGGACAAAACCAATGGTGCT
TCCTGGACAGCCTGGTTTCCCATTCATAACAGACAAAACTGATGCTGACTATGCTGACAG
GAAATTCAAGAGCTCCCCAATTTAAAGATGCTTTATAGACAAATTGTAGTATTTGGTACT
GTCAAACAAATTATCAAATAACAAATGCTGATATTTGTAAATTAATAATAATATGTTTTG
TTTTATTTCAATAAATAGCTGTTACAACAACTGTAATTCTTATAATTTAAGCAAAGTGAA
TTCCTTCTGCATTGAAAGCATGCAGTAACTTCATAAAGTCATCAATATCCATAGTTCTGG
CTCTCATTTGATCAGCTTCACAGGATGTCAATATTTCTTGCACTTTTACTTTTATATCAA
AATCTTCAGGGATTTCCTTATTATGTAATGAACAGTGAACCCTATAATTCTTCTCTAAAG
CAGCCATTGTGGTTGCATGTTTAAAAGCTGCTGACAGTGTTTTGTTCTTCCGTACAAATG
CTATCCTAGTAAGACCATCCCATTCTACAAAATTGATTGGTGGTGGCGGGTTCCTTGGTT
CTATTCTCACAACACTAGACTCCACTTTGGGTGGTGGTCTGAAGTTATTTTTACCAACCT
TCATCAACATGTCAACTCTAGCTAATAATTGAGTGTTTATTGATAGCCTGCAGTACAACT
TGTCACCTGGCTTTGCCACCAATCTTTGTGCAAATTCTTTTTGGAACATAAGTACTGCAC
ATCTGAAGAAAGGTCTATGTAAGAGCAATTTAAAAACTAACGGTGAACTAATTTGGTATG
GTATATTTGCCACACAAATATCAAAAAATGGTAATTCTGTTTTTAATACATCTCCAACAA
GAATTTGTAGTTTTGCTTGATAAGGTGTACCCTGCACACGTTTTTGAAGTTCAGCAACTA
ATCTTGTATCTATTTCACAGGCTATAACTTTTTTAACACGGTCGAGTAGCTTGACTGTCA
TATTACCAGTACCAGGACCAATCTCAAGAGCTACATCTGTTGGCCTCAGTCCAGATTTGT
CTAGCATAGACGTTATAATTAAGGGGTTCTTTAATATATGCTGGCCGAAATCCTTATTGA
ATTGAATACCTTGTTTAGCTACTTCTTTATGAATTCTGGATTTCTTTTCAGTTTTTATTT
TCGGCATTTTTCTGTATTTTATTAGGAGTCCTTATGTAAGTAAACAAAATTTTATGAATT
TCCACATGAGATTGAGGTTAGAAATAAAACAAACACCACTCAACTTCAAGTGGAAATTCA
TAAAATTTTAT
(1871 bp)

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